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The map label for this gene is yfnA [H]

Identifier: 182681873

GI number: 182681873

Start: 1479697

End: 1481187

Strand: Direct

Name: yfnA [H]

Synonym: XfasM23_1341

Alternate gene names: 182681873

Gene position: 1479697-1481187 (Clockwise)

Preceding gene: 182681872

Following gene: 182681874

Centisome position: 58.35

GC content: 56.94

Gene sequence:

>1491_bases
ATGACTCACGCGACCATCTATCAGGGGGAGGAACGTCGCATGCTCAAAAAACATTTATTCATCGTCAAACCGATCGAGCC
GACAAATCACACAGGGACAGGTAAAGGCGGAACGCAACTCAAAAGATCGCTAACGGCAGGACAGTTAGTGATGCTCGGCA
TCGGGGCCGTGATTGGCGCTGGTATTTTCGTGCTCAGCGGACACGCTGCCGCCGAGTATGCCGGCCCAGCCGTGGTGCTG
AGCTACATTCTGGCGGGAATTGCCTGTGCTTTGGCTGGGTTGTGTTATGCAGAGTTCGCGGCAATGCTGCCGGTCTCCGG
TTCCGCTTACTCTTATGCCTACGCGACGCTCGGGGAATTCACGGCTTGGTTCATCGGTTGGAATCTGATCCTGGAATATA
TGTTCTCTGCCTCAACCGTGGCGGTCGGCTGGTCCGGTTATCTCAATAGTTTCCTGAGCAGTTTCGGTTATGGGCTGCCA
GCCTCGCTATCTAGTGCACCTCTGGACGTAGTCGATGGGCGGCTGATTTATAGCGGTGGCCTGATCAATCTGCCGGCAGT
CGCGATTGTGGCCGCGATCAGTGGGCTGTGCTACGTCGGGATCACTCAATCGGCGTTCGTCAACTCCATCACCGTGGCGA
TCAAGGTCAGTGTCATCGTGCTGTTCATCGCTTTCGCCGCACGCTATGTCAACCCGGACAACTGGGTCCCCTTCGTCCCG
GACAACGTGGCACCAGGCAAGTACGGCATTGAAGGGGTGATCCGCGGTGCAGCCGTGGTGTTTTTCTCCTATATCGGCTT
TGATGCAGTCTCCACCACTGCGGGGGAAGCCAAGAATCCGCAACGTGACATGCCCATCGGCATCCTCGGCTCGCTCGCCA
TCTGTACGGTGATCTACATTGCCTTCTCCGGTGTTCTCACCGGCCTGATGCACTACTCGCAGTTGGATACGCCCAAACCC
GTGGCCACCGCGCTGGAAACCTACCCAACGCTGTCATGGCTCAAGCATGTCGTAGAAATCGGCGCGATTGCAGGGCTAAG
TTCAACGATGCTGATGATGCTGATGGCACAACCGCGGATTTTCTACGCGATGTCGCAGGATGGCCTGCTGCCCAAGTTGC
TTTCTAAAGTACATCCAAAATTCCAGACTCCCCACGTAGGTACGCTCATCGTCGGTGCCTGTGCCTGTGCTTTAGCCGGA
CTGTTTCCAATCAGTCTGCTTGGCGATCTGGTCTCCATGGGCACGCTGCTAGCATTCGCGACGGTCTGCATTGGCATCGT
GGTACTACGCCGTACCCGCCCGGATCTGCCTCGCCCCTTCCGGGTCCCCGTGTACTGGGTGATCGCCCCTACAGGTGCGG
CAGCCTGTCTGTACCTGTTCTGGCAGCCGTTCACCGAGCACTGGCCGCTGATGGTCGGTTGGACGGTACTCGGCTTGGTG
ATGTATGGCTTATACGGCTATCAGCACAGTAAATTACGACATGGTGGCTAA

Upstream 100 bases:

>100_bases
TGTACTGAGACTAAGTTGTAATACTGCTTGTGTTGTTCCACACCTATTGGCAAGGTAAGCATCGCCTGACGTTGGTTATC
TACTGCCAATTTTAAGATTT

Downstream 100 bases:

>100_bases
GCAATAAGCACTCAGGAGGCCGGCGCAACGCCGGCCTCTTTTACTAATTACACTTTTTATCAATTTCCTGACGCACTATG
TTCAAACAACTCTGGGCCAC

Product: amino acid permease-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MTHATIYQGEERRMLKKHLFIVKPIEPTNHTGTGKGGTQLKRSLTAGQLVMLGIGAVIGAGIFVLSGHAAAEYAGPAVVL
SYILAGIACALAGLCYAEFAAMLPVSGSAYSYAYATLGEFTAWFIGWNLILEYMFSASTVAVGWSGYLNSFLSSFGYGLP
ASLSSAPLDVVDGRLIYSGGLINLPAVAIVAAISGLCYVGITQSAFVNSITVAIKVSVIVLFIAFAARYVNPDNWVPFVP
DNVAPGKYGIEGVIRGAAVVFFSYIGFDAVSTTAGEAKNPQRDMPIGILGSLAICTVIYIAFSGVLTGLMHYSQLDTPKP
VATALETYPTLSWLKHVVEIGAIAGLSSTMLMMLMAQPRIFYAMSQDGLLPKLLSKVHPKFQTPHVGTLIVGACACALAG
LFPISLLGDLVSMGTLLAFATVCIGIVVLRRTRPDLPRPFRVPVYWVIAPTGAAACLYLFWQPFTEHWPLMVGWTVLGLV
MYGLYGYQHSKLRHGG

Sequences:

>Translated_496_residues
MTHATIYQGEERRMLKKHLFIVKPIEPTNHTGTGKGGTQLKRSLTAGQLVMLGIGAVIGAGIFVLSGHAAAEYAGPAVVL
SYILAGIACALAGLCYAEFAAMLPVSGSAYSYAYATLGEFTAWFIGWNLILEYMFSASTVAVGWSGYLNSFLSSFGYGLP
ASLSSAPLDVVDGRLIYSGGLINLPAVAIVAAISGLCYVGITQSAFVNSITVAIKVSVIVLFIAFAARYVNPDNWVPFVP
DNVAPGKYGIEGVIRGAAVVFFSYIGFDAVSTTAGEAKNPQRDMPIGILGSLAICTVIYIAFSGVLTGLMHYSQLDTPKP
VATALETYPTLSWLKHVVEIGAIAGLSSTMLMMLMAQPRIFYAMSQDGLLPKLLSKVHPKFQTPHVGTLIVGACACALAG
LFPISLLGDLVSMGTLLAFATVCIGIVVLRRTRPDLPRPFRVPVYWVIAPTGAAACLYLFWQPFTEHWPLMVGWTVLGLV
MYGLYGYQHSKLRHGG
>Mature_495_residues
THATIYQGEERRMLKKHLFIVKPIEPTNHTGTGKGGTQLKRSLTAGQLVMLGIGAVIGAGIFVLSGHAAAEYAGPAVVLS
YILAGIACALAGLCYAEFAAMLPVSGSAYSYAYATLGEFTAWFIGWNLILEYMFSASTVAVGWSGYLNSFLSSFGYGLPA
SLSSAPLDVVDGRLIYSGGLINLPAVAIVAAISGLCYVGITQSAFVNSITVAIKVSVIVLFIAFAARYVNPDNWVPFVPD
NVAPGKYGIEGVIRGAAVVFFSYIGFDAVSTTAGEAKNPQRDMPIGILGSLAICTVIYIAFSGVLTGLMHYSQLDTPKPV
ATALETYPTLSWLKHVVEIGAIAGLSSTMLMMLMAQPRIFYAMSQDGLLPKLLSKVHPKFQTPHVGTLIVGACACALAGL
FPISLLGDLVSMGTLLAFATVCIGIVVLRRTRPDLPRPFRVPVYWVIAPTGAAACLYLFWQPFTEHWPLMVGWTVLGLVM
YGLYGYQHSKLRHGG

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI258614005, Length=420, Percent_Identity=37.3809523809524, Blast_Score=248, Evalue=1e-65,
Organism=Homo sapiens, GI258614003, Length=420, Percent_Identity=37.3809523809524, Blast_Score=247, Evalue=1e-65,
Organism=Homo sapiens, GI4507047, Length=435, Percent_Identity=36.0919540229885, Blast_Score=246, Evalue=3e-65,
Organism=Homo sapiens, GI114326544, Length=434, Percent_Identity=35.2534562211982, Blast_Score=242, Evalue=7e-64,
Organism=Homo sapiens, GI114326550, Length=434, Percent_Identity=35.2534562211982, Blast_Score=242, Evalue=7e-64,
Organism=Homo sapiens, GI258645169, Length=420, Percent_Identity=36.9047619047619, Blast_Score=239, Evalue=6e-63,
Organism=Homo sapiens, GI181337167, Length=395, Percent_Identity=35.6962025316456, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI110347453, Length=421, Percent_Identity=35.3919239904988, Blast_Score=212, Evalue=7e-55,
Organism=Homo sapiens, GI186910308, Length=430, Percent_Identity=25.3488372093023, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI186910306, Length=430, Percent_Identity=25.3488372093023, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI186910304, Length=430, Percent_Identity=25.3488372093023, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI115648063, Length=433, Percent_Identity=23.3256351039261, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI115648022, Length=433, Percent_Identity=23.3256351039261, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI187423910, Length=418, Percent_Identity=24.4019138755981, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI7657591, Length=418, Percent_Identity=24.4019138755981, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI71979932, Length=224, Percent_Identity=30.3571428571429, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI33286428, Length=442, Percent_Identity=25.3393665158371, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI87082250, Length=434, Percent_Identity=26.4976958525346, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI87081869, Length=439, Percent_Identity=22.7790432801822, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1786302, Length=434, Percent_Identity=24.8847926267281, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1788480, Length=382, Percent_Identity=23.2984293193717, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI87082023, Length=456, Percent_Identity=23.6842105263158, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI87081708, Length=358, Percent_Identity=22.9050279329609, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1790653, Length=412, Percent_Identity=21.6019417475728, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI87081915, Length=451, Percent_Identity=22.3946784922395, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1789017, Length=364, Percent_Identity=23.3516483516484, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI48994972, Length=368, Percent_Identity=22.2826086956522, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=417, Percent_Identity=34.052757793765, Blast_Score=232, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI17533459, Length=399, Percent_Identity=35.3383458646617, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17531343, Length=497, Percent_Identity=30.3822937625755, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17568033, Length=440, Percent_Identity=22.5, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17537453, Length=343, Percent_Identity=22.4489795918367, Blast_Score=76, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17540018, Length=188, Percent_Identity=27.1276595744681, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71982612, Length=420, Percent_Identity=22.3809523809524, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71982608, Length=420, Percent_Identity=22.3809523809524, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71993915, Length=458, Percent_Identity=24.235807860262, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI32566699, Length=382, Percent_Identity=21.4659685863874, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24667468, Length=450, Percent_Identity=36.6666666666667, Blast_Score=266, Evalue=2e-71,
Organism=Drosophila melanogaster, GI24668806, Length=424, Percent_Identity=36.7924528301887, Blast_Score=266, Evalue=3e-71,
Organism=Drosophila melanogaster, GI21356285, Length=424, Percent_Identity=36.7924528301887, Blast_Score=266, Evalue=3e-71,
Organism=Drosophila melanogaster, GI24668802, Length=424, Percent_Identity=36.7924528301887, Blast_Score=266, Evalue=3e-71,
Organism=Drosophila melanogaster, GI221512776, Length=426, Percent_Identity=37.793427230047, Blast_Score=262, Evalue=5e-70,
Organism=Drosophila melanogaster, GI24666159, Length=426, Percent_Identity=37.793427230047, Blast_Score=261, Evalue=6e-70,
Organism=Drosophila melanogaster, GI281366235, Length=407, Percent_Identity=36.6093366093366, Blast_Score=224, Evalue=8e-59,
Organism=Drosophila melanogaster, GI116007820, Length=407, Percent_Identity=36.6093366093366, Blast_Score=224, Evalue=8e-59,
Organism=Drosophila melanogaster, GI116007818, Length=409, Percent_Identity=36.919315403423, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI85725152, Length=409, Percent_Identity=36.919315403423, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI161077963, Length=417, Percent_Identity=34.2925659472422, Blast_Score=195, Evalue=7e-50,
Organism=Drosophila melanogaster, GI221331183, Length=469, Percent_Identity=22.8144989339019, Blast_Score=87, Evalue=4e-17,
Organism=Drosophila melanogaster, GI17647653, Length=469, Percent_Identity=22.8144989339019, Blast_Score=87, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24664379, Length=469, Percent_Identity=22.8144989339019, Blast_Score=87, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24651635, Length=427, Percent_Identity=24.824355971897, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24651633, Length=427, Percent_Identity=24.824355971897, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21357367, Length=426, Percent_Identity=22.5352112676056, Blast_Score=75, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR015606 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 52830; Mature: 52699

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHATIYQGEERRMLKKHLFIVKPIEPTNHTGTGKGGTQLKRSLTAGQLVMLGIGAVIGA
CCCCCEEECHHHHHHHHHCEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
GIFVLSGHAAAEYAGPAVVLSYILAGIACALAGLCYAEFAAMLPVSGSAYSYAYATLGEF
HHHEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
TAWFIGWNLILEYMFSASTVAVGWSGYLNSFLSSFGYGLPASLSSAPLDVVDGRLIYSGG
HHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEEECC
LINLPAVAIVAAISGLCYVGITQSAFVNSITVAIKVSVIVLFIAFAARYVNPDNWVPFVP
CCCHHHHHHHHHHHCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DNVAPGKYGIEGVIRGAAVVFFSYIGFDAVSTTAGEAKNPQRDMPIGILGSLAICTVIYI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
AFSGVLTGLMHYSQLDTPKPVATALETYPTLSWLKHVVEIGAIAGLSSTMLMMLMAQPRI
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCE
FYAMSQDGLLPKLLSKVHPKFQTPHVGTLIVGACACALAGLFPISLLGDLVSMGTLLAFA
EEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVCIGIVVLRRTRPDLPRPFRVPVYWVIAPTGAAACLYLFWQPFTEHWPLMVGWTVLGLV
HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
MYGLYGYQHSKLRHGG
HHHHHCCCCCHHCCCC
>Mature Secondary Structure 
THATIYQGEERRMLKKHLFIVKPIEPTNHTGTGKGGTQLKRSLTAGQLVMLGIGAVIGA
CCCCEEECHHHHHHHHHCEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
GIFVLSGHAAAEYAGPAVVLSYILAGIACALAGLCYAEFAAMLPVSGSAYSYAYATLGEF
HHHEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
TAWFIGWNLILEYMFSASTVAVGWSGYLNSFLSSFGYGLPASLSSAPLDVVDGRLIYSGG
HHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEEECC
LINLPAVAIVAAISGLCYVGITQSAFVNSITVAIKVSVIVLFIAFAARYVNPDNWVPFVP
CCCHHHHHHHHHHHCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DNVAPGKYGIEGVIRGAAVVFFSYIGFDAVSTTAGEAKNPQRDMPIGILGSLAICTVIYI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
AFSGVLTGLMHYSQLDTPKPVATALETYPTLSWLKHVVEIGAIAGLSSTMLMMLMAQPRI
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCE
FYAMSQDGLLPKLLSKVHPKFQTPHVGTLIVGACACALAGLFPISLLGDLVSMGTLLAFA
EEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVCIGIVVLRRTRPDLPRPFRVPVYWVIAPTGAAACLYLFWQPFTEHWPLMVGWTVLGLV
HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
MYGLYGYQHSKLRHGG
HHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]