| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182681869
Identifier: 182681869
GI number: 182681869
Start: 1475378
End: 1475827
Strand: Direct
Name: 182681869
Synonym: XfasM23_1337
Alternate gene names: NA
Gene position: 1475378-1475827 (Clockwise)
Preceding gene: 182681868
Following gene: 182681870
Centisome position: 58.18
GC content: 54.67
Gene sequence:
>450_bases ATGAGTGCAATCGTTTTAGCCGTTGCGTTGGCCGCTGGGCAAGTCAAGGAGCCGCCTGCGGCTGTAGGTATGAGTGAAAG TCAGGCGGAGCAGTCTGCGATGCTGCTTGCGCACTGTGCTGGTGTGTGGGACTGGATGGGGAATATAGAAAAGGTGGCTG GGAAGTCTTCCAATGTGGAGCAGTTCCATAGGAAGGCAGATGAGGCGGAAACGGCGGCAATGTGGGTGTTGGCTTCACAG CATTATGTGGCTACGGGGAACACAGCCAGTAATAGGCATTGGAAATCGCTTACAGGCCCGAAGCGGGAAGCCGGGTTAGC GCATCTGAATGCGTTAGCGGAACAGGGCAAGGAGGAGGCATCGGTGGCTGCCATCAAGGGATGTCAGGGGATGTTGCAGG AGCAGGAAAAGATTCTGCACATGATGCAAAAGACTAAGGTGAAGCAATGA
Upstream 100 bases:
>100_bases GAGGGGATGGGTGTTGCTGGCGGTGATGTGGAATGCGGTAGCGTTGGCTGCCCCATCAAGCAGACAATAGATTGGTAATC GACTGAGTAAGGGGTCTTTG
Downstream 100 bases:
>100_bases GGGGGTGTGGGTGATGTTGTCAGGGGGTTGTAGGGGGCGATCTATGGGTATGCGAGGCATCCACGACAGGGGTTTGATGT GATGAAAGCCAGTGAGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSAIVLAVALAAGQVKEPPAAVGMSESQAEQSAMLLAHCAGVWDWMGNIEKVAGKSSNVEQFHRKADEAETAAMWVLASQ HYVATGNTASNRHWKSLTGPKREAGLAHLNALAEQGKEEASVAAIKGCQGMLQEQEKILHMMQKTKVKQ
Sequences:
>Translated_149_residues MSAIVLAVALAAGQVKEPPAAVGMSESQAEQSAMLLAHCAGVWDWMGNIEKVAGKSSNVEQFHRKADEAETAAMWVLASQ HYVATGNTASNRHWKSLTGPKREAGLAHLNALAEQGKEEASVAAIKGCQGMLQEQEKILHMMQKTKVKQ >Mature_148_residues SAIVLAVALAAGQVKEPPAAVGMSESQAEQSAMLLAHCAGVWDWMGNIEKVAGKSSNVEQFHRKADEAETAAMWVLASQH YVATGNTASNRHWKSLTGPKREAGLAHLNALAEQGKEEASVAAIKGCQGMLQEQEKILHMMQKTKVKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15978; Mature: 15847
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIVLAVALAAGQVKEPPAAVGMSESQAEQSAMLLAHCAGVWDWMGNIEKVAGKSSNVE CHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH QFHRKADEAETAAMWVLASQHYVATGNTASNRHWKSLTGPKREAGLAHLNALAEQGKEEA HHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCHHHH SVAAIKGCQGMLQEQEKILHMMQKTKVKQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SAIVLAVALAAGQVKEPPAAVGMSESQAEQSAMLLAHCAGVWDWMGNIEKVAGKSSNVE HHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH QFHRKADEAETAAMWVLASQHYVATGNTASNRHWKSLTGPKREAGLAHLNALAEQGKEEA HHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCHHHH SVAAIKGCQGMLQEQEKILHMMQKTKVKQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA