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The map label for this gene is ybhB [H]

Identifier: 182681840

GI number: 182681840

Start: 1437466

End: 1438080

Strand: Direct

Name: ybhB [H]

Synonym: XfasM23_1305

Alternate gene names: 182681840

Gene position: 1437466-1438080 (Clockwise)

Preceding gene: 182681839

Following gene: 182681841

Centisome position: 56.69

GC content: 53.82

Gene sequence:

>615_bases
ATGCATTTAATCAGTAACGACTTCAAAAATGGCCAACCCATCCCGGTTGAATGCGCTGCTGGCCAAACTGACGGCTTTGC
CCCCAACCGTAACCCGCACCTAGCATGGGACAACGTTCCAGAAAACACCCGTTCCTTCGCACTGCTGTGTATAGATCCAG
ACGTACCGAGCATTCCAGAAACTATCGGTCGTACCGATATGGAAATCCCAGTGACACAACCACGTATTGACTTCGTGCAT
TGGGTCATGACTGACATCTCTACCGACCTACGTATGATTGCCCACGGCAGTTGCAGCGATGGCTTTGTGGTAGGCGGCAA
GACCATGCCACCTGGGCCAGCAGGCACACACCAGGGCTTGAACGACTACACGAAATTCTTTGCCAACACCCCTGAAATGG
CCGGTGATTATTATGGCTATGACGGCCCGTACCCACCGTTCAACGACCTGCGCATACACCGCTACCTCTTCCGTCTGTTC
GCACTTGACCTGGAACACTTGCCCCTTCACAAACGCTTTGACGGCCCCACACTCCTGCGCACGATACAGGGCCACGTATT
GACCGAAGCCACCCTATACGGGACCTACACCCTCAACCCCAAGGCCCAAAAATAA

Upstream 100 bases:

>100_bases
CTTTGACTGAAGAGCACACCGCAAGCGTTAAGATGTCTTCTCATATTGCTTCCCAGAGGGCCCTACACGGACCTGCTGAG
ACTGACCACGGAAACATCAC

Downstream 100 bases:

>100_bases
TGCAGCGCTACCTTCCAGCAAGCATGCAATCCAACCCGCCTAATGAAAGTTCACAGCGCAAACATCCTACAAAACGTTCA
CACGCTGCCGACATTCGCAG

Product: PEBP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MHLISNDFKNGQPIPVECAAGQTDGFAPNRNPHLAWDNVPENTRSFALLCIDPDVPSIPETIGRTDMEIPVTQPRIDFVH
WVMTDISTDLRMIAHGSCSDGFVVGGKTMPPGPAGTHQGLNDYTKFFANTPEMAGDYYGYDGPYPPFNDLRIHRYLFRLF
ALDLEHLPLHKRFDGPTLLRTIQGHVLTEATLYGTYTLNPKAQK

Sequences:

>Translated_204_residues
MHLISNDFKNGQPIPVECAAGQTDGFAPNRNPHLAWDNVPENTRSFALLCIDPDVPSIPETIGRTDMEIPVTQPRIDFVH
WVMTDISTDLRMIAHGSCSDGFVVGGKTMPPGPAGTHQGLNDYTKFFANTPEMAGDYYGYDGPYPPFNDLRIHRYLFRLF
ALDLEHLPLHKRFDGPTLLRTIQGHVLTEATLYGTYTLNPKAQK
>Mature_204_residues
MHLISNDFKNGQPIPVECAAGQTDGFAPNRNPHLAWDNVPENTRSFALLCIDPDVPSIPETIGRTDMEIPVTQPRIDFVH
WVMTDISTDLRMIAHGSCSDGFVVGGKTMPPGPAGTHQGLNDYTKFFANTPEMAGDYYGYDGPYPPFNDLRIHRYLFRLF
ALDLEHLPLHKRFDGPTLLRTIQGHVLTEATLYGTYTLNPKAQK

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786990, Length=197, Percent_Identity=27.9187817258883, Blast_Score=80, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 22812; Mature: 22812

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLISNDFKNGQPIPVECAAGQTDGFAPNRNPHLAWDNVPENTRSFALLCIDPDVPSIPE
CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCHH
TIGRTDMEIPVTQPRIDFVHWVMTDISTDLRMIAHGSCSDGFVVGGKTMPPGPAGTHQGL
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEECCCCCCCCCCCCCCCH
NDYTKFFANTPEMAGDYYGYDGPYPPFNDLRIHRYLFRLFALDLEHLPLHKRFDGPTLLR
HHHHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
TIQGHVLTEATLYGTYTLNPKAQK
HHHCCEEEEEEEEEEEEECCCCCC
>Mature Secondary Structure
MHLISNDFKNGQPIPVECAAGQTDGFAPNRNPHLAWDNVPENTRSFALLCIDPDVPSIPE
CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCHH
TIGRTDMEIPVTQPRIDFVHWVMTDISTDLRMIAHGSCSDGFVVGGKTMPPGPAGTHQGL
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEECCCCCCCCCCCCCCCH
NDYTKFFANTPEMAGDYYGYDGPYPPFNDLRIHRYLFRLFALDLEHLPLHKRFDGPTLLR
HHHHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
TIQGHVLTEATLYGTYTLNPKAQK
HHHCCEEEEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058702; 9278503; 11439028 [H]