| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is apaH
Identifier: 182681825
GI number: 182681825
Start: 1420917
End: 1421804
Strand: Direct
Name: apaH
Synonym: XfasM23_1290
Alternate gene names: 182681825
Gene position: 1420917-1421804 (Clockwise)
Preceding gene: 182681824
Following gene: 182681826
Centisome position: 56.04
GC content: 53.94
Gene sequence:
>888_bases ATGAGCATCTGGGCCATCGGCGACCTGCAAGGCTGCTACGACGCCACCCAACGTTTGCTAGAAAATATCCGCTTCGACCC TTCACAGGATACGTTGTGGTTTTGCGGCGACTTAGTCAATCGCGGCGGTCAATCGTTGGAAACGCTACGCTTAGTGCATT CACTCCGCAGCCACAGCGTCGTCGTACTGGGTAACCACGATCTTTCCCTATTAGCAGTTACCGTACGCAGCGAAGAAGAA CAACGCAAGGTCAATCCCGATCTGCTACGCATCATCACCGCTGAAGATCGCGACGAAATACTGACCTGGCTACGCATGCA AAAACTGATCCATGTTGATCGCACCATCGGCTGGATGATGGTGCATGCAGGATTAGCGCCGAAGTGGACAACTCAGATGG CAGAGAAGCTAGCACACGAGGTAGAACAGCAACTACACGGCACCGACTACCGTAAGCTACTGCACAGTATGTATGGCGAC AAACCGGAATGGTCGCCAGCGCTAAGCGGCTGCAACCGCAGCCGTGCAATCATCAACGTGCTAACACGCATGCGCTACTG CACTCCACGCGGGCGAATCTCTACCGAAGACAAAGGAACACCAGGGACGCAAACTCAAGGTATGTATCCGTGGTTTGAAG TCCCAGGCAGGGTTGAACGTGATCTGAAGATCGTCTGCGGCCATTGGTCGACGCTAGGATTGACCATCACTCAAGGTATC CACGCAATCGACACTGGTGCAGTCTGGGGCGGAAAACTCACTGCATTACAGATCGACACCGACGAATTACGCCTAGCACA GGTACACGGCCTGTCAATCGAACATCCGCGACACACGCACACACCGCGTCGAAAAGCAAAAAAGCGCCACAAACGCTCCC CAAAGTAG
Upstream 100 bases:
>100_bases ATTACGACATGATGGCCGATGACGGTACCGAATTCACCGCCACAATCTCCCCATTCGTACTCAGTGTGCCGCGAACACTA CACTGACGGAGGCGCAATAG
Downstream 100 bases:
>100_bases TGGACGAACATCACTTATTTCTATAACCCAAGTGGTATGTTGCCAAGACAAGACAAAAACTCGTAAAAATGAGCGGCTTG TCGATGAAGCATCCACCAAA
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSIWAIGDLQGCYDATQRLLENIRFDPSQDTLWFCGDLVNRGGQSLETLRLVHSLRSHSVVVLGNHDLSLLAVTVRSEEE QRKVNPDLLRIITAEDRDEILTWLRMQKLIHVDRTIGWMMVHAGLAPKWTTQMAEKLAHEVEQQLHGTDYRKLLHSMYGD KPEWSPALSGCNRSRAIINVLTRMRYCTPRGRISTEDKGTPGTQTQGMYPWFEVPGRVERDLKIVCGHWSTLGLTITQGI HAIDTGAVWGGKLTALQIDTDELRLAQVHGLSIEHPRHTHTPRRKAKKRHKRSPK
Sequences:
>Translated_295_residues MSIWAIGDLQGCYDATQRLLENIRFDPSQDTLWFCGDLVNRGGQSLETLRLVHSLRSHSVVVLGNHDLSLLAVTVRSEEE QRKVNPDLLRIITAEDRDEILTWLRMQKLIHVDRTIGWMMVHAGLAPKWTTQMAEKLAHEVEQQLHGTDYRKLLHSMYGD KPEWSPALSGCNRSRAIINVLTRMRYCTPRGRISTEDKGTPGTQTQGMYPWFEVPGRVERDLKIVCGHWSTLGLTITQGI HAIDTGAVWGGKLTALQIDTDELRLAQVHGLSIEHPRHTHTPRRKAKKRHKRSPK >Mature_294_residues SIWAIGDLQGCYDATQRLLENIRFDPSQDTLWFCGDLVNRGGQSLETLRLVHSLRSHSVVVLGNHDLSLLAVTVRSEEEQ RKVNPDLLRIITAEDRDEILTWLRMQKLIHVDRTIGWMMVHAGLAPKWTTQMAEKLAHEVEQQLHGTDYRKLLHSMYGDK PEWSPALSGCNRSRAIINVLTRMRYCTPRGRISTEDKGTPGTQTQGMYPWFEVPGRVERDLKIVCGHWSTLGLTITQGIH AIDTGAVWGGKLTALQIDTDELRLAQVHGLSIEHPRHTHTPRRKAKKRHKRSPK
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family
Homologues:
Organism=Escherichia coli, GI1786234, Length=259, Percent_Identity=44.015444015444, Blast_Score=220, Evalue=9e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APAH_XYLF2 (B2I5R6)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001829985.1 - ProteinModelPortal: B2I5R6 - SMR: B2I5R6 - GeneID: 6203854 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_1290 - HOGENOM: HBG724457 - OMA: LVFGHWA - ProtClustDB: PRK00166 - HAMAP: MF_00199 - InterPro: IPR004617 - InterPro: IPR004843 - PIRSF: PIRSF000903 - TIGRFAMs: TIGR00668
Pfam domain/function: PF00149 Metallophos
EC number: =3.6.1.41
Molecular weight: Translated: 33637; Mature: 33506
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIWAIGDLQGCYDATQRLLENIRFDPSQDTLWFCGDLVNRGGQSLETLRLVHSLRSHSV CCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCE VVLGNHDLSLLAVTVRSEEEQRKVNPDLLRIITAEDRDEILTWLRMQKLIHVDRTIGWMM EEEECCCCEEEEEEECCCHHHHCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH VHAGLAPKWTTQMAEKLAHEVEQQLHGTDYRKLLHSMYGDKPEWSPALSGCNRSRAIINV HHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHH LTRMRYCTPRGRISTEDKGTPGTQTQGMYPWFEVPGRVERDLKIVCGHWSTLGLTITQGI HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEECCCCHHCEEHHCCC HAIDTGAVWGGKLTALQIDTDELRLAQVHGLSIEHPRHTHTPRRKAKKRHKRSPK CEECCCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure SIWAIGDLQGCYDATQRLLENIRFDPSQDTLWFCGDLVNRGGQSLETLRLVHSLRSHSV CEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCE VVLGNHDLSLLAVTVRSEEEQRKVNPDLLRIITAEDRDEILTWLRMQKLIHVDRTIGWMM EEEECCCCEEEEEEECCCHHHHCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH VHAGLAPKWTTQMAEKLAHEVEQQLHGTDYRKLLHSMYGDKPEWSPALSGCNRSRAIINV HHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHH LTRMRYCTPRGRISTEDKGTPGTQTQGMYPWFEVPGRVERDLKIVCGHWSTLGLTITQGI HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEECCCCHHCEEHHCCC HAIDTGAVWGGKLTALQIDTDELRLAQVHGLSIEHPRHTHTPRRKAKKRHKRSPK CEECCCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA