| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681800
Identifier: 182681800
GI number: 182681800
Start: 1392898
End: 1393164
Strand: Direct
Name: 182681800
Synonym: XfasM23_1261
Alternate gene names: NA
Gene position: 1392898-1393164 (Clockwise)
Preceding gene: 182681799
Following gene: 182681806
Centisome position: 54.93
GC content: 54.68
Gene sequence:
>267_bases TTGGCCTGGACGATTGATTACACCGACACGGCCAAGCAGCAGTTACGCAAGCTCGACAAGCACATGGCGCGGCGCATTGT CGATTTCATGGATGAGCGCATCGCCGGACTAGAAAACCCACGCAGCAGTGGTAAAGCATTAACCGGACCACTTGGCGGCT TTTGGCGTTATCGTGTTGGTGATTTCCGGGTCGTCTGCGCCATTCAAGATAGCGTTTTGCGCGTCCTTGTAGTGCGTGTT GGTCACCGGGGTGAGATTTACCGATAG
Upstream 100 bases:
>100_bases ATTGAGGAAATGGAGGATTACTACCTTGCTGCCGATGTGTTGGAACGTGTCCGTCATGGACAAGAACAGGTGCATTCTGC TGCCGATGTGAGGAAAACGC
Downstream 100 bases:
>100_bases GCTGGACGGATCAAAACGCCACAGCACTACCGGTATTGCGCAGCGCCATCTGGTGGTGTCTGTTGATGTCGGCGGCGGCT TGGCGACCGGCCAGGATCGG
Product: addiction module antitoxin
Products: NA
Alternate protein names: Plasmid Addiction System Poison Protein; Addiction Module Antitoxin; Xin-Like Protein; Plasmid Stabilization System Protein; Xin-Antitoxin System Toxin Component RelE Family; Plasmid Stabilization System; Plasmid Stabilisation System Protein; Plasmid Addiction System xin Protein; Addiction Module xin RelE/StbE; RelE-Domain-Containing Protein; RelE Protein; Plasmid Stabilization System Family Protein; RelE/StbE Family Addiction Module xin
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MAWTIDYTDTAKQQLRKLDKHMARRIVDFMDERIAGLENPRSSGKALTGPLGGFWRYRVGDFRVVCAIQDSVLRVLVVRV GHRGEIYR
Sequences:
>Translated_88_residues MAWTIDYTDTAKQQLRKLDKHMARRIVDFMDERIAGLENPRSSGKALTGPLGGFWRYRVGDFRVVCAIQDSVLRVLVVRV GHRGEIYR >Mature_87_residues AWTIDYTDTAKQQLRKLDKHMARRIVDFMDERIAGLENPRSSGKALTGPLGGFWRYRVGDFRVVCAIQDSVLRVLVVRVG HRGEIYR
Specific function: Unknown
COG id: COG2026
COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10164; Mature: 10033
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWTIDYTDTAKQQLRKLDKHMARRIVDFMDERIAGLENPRSSGKALTGPLGGFWRYRVG CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECC DFRVVCAIQDSVLRVLVVRVGHRGEIYR CEEEEEEHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AWTIDYTDTAKQQLRKLDKHMARRIVDFMDERIAGLENPRSSGKALTGPLGGFWRYRVG EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECC DFRVVCAIQDSVLRVLVVRVGHRGEIYR CEEEEEEHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA