| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681787
Identifier: 182681787
GI number: 182681787
Start: 1384223
End: 1385200
Strand: Direct
Name: 182681787
Synonym: XfasM23_1248
Alternate gene names: NA
Gene position: 1384223-1385200 (Clockwise)
Preceding gene: 182681786
Following gene: 182681788
Centisome position: 54.59
GC content: 50.82
Gene sequence:
>978_bases ATGAACACTCTTATCCTGCCTAAATTAAAAACCTTCCTATGGCTGCTCAAGCGCGAATATTGGGAACATCGCGGCAGCTT TTTCTGGGCCCCAGTCATCACTGGGGCGATCGCCGTGTTTTTCGGGATTCTCGGTACAGTGATCGGGGTGACTCGTTCAA TTAATAACGGCACAAATGGAAGCATTTATACGGGGGATGCCGAGTACTTCCTTGGCCCCGCGGGCGATATCTTAATACTG AGCAGCATCTTTTTAATCAGCGTGGTGCTCACCTTCTCCGTGCTGTTCTACGCATTGAGCAGCCTGCACAACGATCGCCA TGACCGCACCATCCTGTTTTGGAAATCGCTGCCAATCTCTGATATCCAAACGGTGCTTTCTAAGGTCACATGGGCACTGC TGCCAGGGCCACTGATCGCCGTGACCGTTGGGATGGTTACCGGGCTGACCCTACTTCTGGTGGCAAGCATCGGCTTACTG ATCGCAGCGCAACCGTACCCATGGGCAATGATCACGCACTCGCATCCATTTCAGATTGTGTCGTTGATGCTGGACGCCAT TCCGAAACAGCTACTGTGGTCACTACCGACAATAGGTTGGCTGATGTTCTGCTCAGCCTGGGTCAAAACAAAACCGTTCT TGTGGGCATTACTGCTACCGATACTCAGCTGCATGATGATCACCATCTTAGGAGCCATGCCGGGTGTCAGCCTGCCTCTG TTTGATATCTGGCACATGGTCGTCTACCGAGGCCTACTAAGCATCATTCCCTTCAGCTGGCTTACACTGAAAGTGAGTGA AGCAAATATGTACAGTAATTATCTCAAGGAATACGAAGATAACTTCATTAACCCTATGCTGCAACAAAGCCAAAGGGTTC AGATTTACCACACCTCCGACCTCTGGATCGGCGTATGCGTCGGTATCGCCTTCATCATCGCCGCTATCTATCTACGCCAC CGCAGTAACGAACTCTGA
Upstream 100 bases:
>100_bases TGTTTGATGGCATCCCCAAAGATCAGCTAACACCCCTCGGCACCACCAGTACACCAAGCTTGGCAGACTTGTTTGTGGCG GTCATGAACGGAACCTACGC
Downstream 100 bases:
>100_bases CTTTTTCTAAGTTCATAACATCCGCATCGCAATAAGCCATTGCCCCCAAGTGGCTACGTGACCTCGACCACATGCAAGAA ATGAAACGGCGCCAGGATGG
Product: putative ABC transporter permease
Products: NA
Alternate protein names: Transmembrane Protein; ABC Transporter Inner Membrane Subunit; ABC Transporter Permease; ABC Transporter Permease Protein
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MNTLILPKLKTFLWLLKREYWEHRGSFFWAPVITGAIAVFFGILGTVIGVTRSINNGTNGSIYTGDAEYFLGPAGDILIL SSIFLISVVLTFSVLFYALSSLHNDRHDRTILFWKSLPISDIQTVLSKVTWALLPGPLIAVTVGMVTGLTLLLVASIGLL IAAQPYPWAMITHSHPFQIVSLMLDAIPKQLLWSLPTIGWLMFCSAWVKTKPFLWALLLPILSCMMITILGAMPGVSLPL FDIWHMVVYRGLLSIIPFSWLTLKVSEANMYSNYLKEYEDNFINPMLQQSQRVQIYHTSDLWIGVCVGIAFIIAAIYLRH RSNEL
Sequences:
>Translated_325_residues MNTLILPKLKTFLWLLKREYWEHRGSFFWAPVITGAIAVFFGILGTVIGVTRSINNGTNGSIYTGDAEYFLGPAGDILIL SSIFLISVVLTFSVLFYALSSLHNDRHDRTILFWKSLPISDIQTVLSKVTWALLPGPLIAVTVGMVTGLTLLLVASIGLL IAAQPYPWAMITHSHPFQIVSLMLDAIPKQLLWSLPTIGWLMFCSAWVKTKPFLWALLLPILSCMMITILGAMPGVSLPL FDIWHMVVYRGLLSIIPFSWLTLKVSEANMYSNYLKEYEDNFINPMLQQSQRVQIYHTSDLWIGVCVGIAFIIAAIYLRH RSNEL >Mature_325_residues MNTLILPKLKTFLWLLKREYWEHRGSFFWAPVITGAIAVFFGILGTVIGVTRSINNGTNGSIYTGDAEYFLGPAGDILIL SSIFLISVVLTFSVLFYALSSLHNDRHDRTILFWKSLPISDIQTVLSKVTWALLPGPLIAVTVGMVTGLTLLLVASIGLL IAAQPYPWAMITHSHPFQIVSLMLDAIPKQLLWSLPTIGWLMFCSAWVKTKPFLWALLLPILSCMMITILGAMPGVSLPL FDIWHMVVYRGLLSIIPFSWLTLKVSEANMYSNYLKEYEDNFINPMLQQSQRVQIYHTSDLWIGVCVGIAFIIAAIYLRH RSNEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36565; Mature: 36565
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: PS00014 ER_TARGET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLILPKLKTFLWLLKREYWEHRGSFFWAPVITGAIAVFFGILGTVIGVTRSINNGTNG CCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SIYTGDAEYFLGPAGDILILSSIFLISVVLTFSVLFYALSSLHNDRHDRTILFWKSLPIS CEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHH DIQTVLSKVTWALLPGPLIAVTVGMVTGLTLLLVASIGLLIAAQPYPWAMITHSHPFQIV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH SLMLDAIPKQLLWSLPTIGWLMFCSAWVKTKPFLWALLLPILSCMMITILGAMPGVSLPL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH FDIWHMVVYRGLLSIIPFSWLTLKVSEANMYSNYLKEYEDNFINPMLQQSQRVQIYHTSD HHHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCC LWIGVCVGIAFIIAAIYLRHRSNEL HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNTLILPKLKTFLWLLKREYWEHRGSFFWAPVITGAIAVFFGILGTVIGVTRSINNGTNG CCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SIYTGDAEYFLGPAGDILILSSIFLISVVLTFSVLFYALSSLHNDRHDRTILFWKSLPIS CEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHH DIQTVLSKVTWALLPGPLIAVTVGMVTGLTLLLVASIGLLIAAQPYPWAMITHSHPFQIV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH SLMLDAIPKQLLWSLPTIGWLMFCSAWVKTKPFLWALLLPILSCMMITILGAMPGVSLPL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH FDIWHMVVYRGLLSIIPFSWLTLKVSEANMYSNYLKEYEDNFINPMLQQSQRVQIYHTSD HHHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCC LWIGVCVGIAFIIAAIYLRHRSNEL HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA