Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

Click here to switch to the map view.

The map label for this gene is 182681776

Identifier: 182681776

GI number: 182681776

Start: 1371206

End: 1371352

Strand: Direct

Name: 182681776

Synonym: XfasM23_1234

Alternate gene names: NA

Gene position: 1371206-1371352 (Clockwise)

Preceding gene: 182681775

Following gene: 182681777

Centisome position: 54.08

GC content: 50.34

Gene sequence:

>147_bases
ATGCTCAGCTACGCGTCCTGGCTGTTTGGGAGCTTAGTACTGCTGAGTATGGTCTGGACCTACGGAATGATGGCTTCACG
TAAGGATGACATTCAGAAGTTTCTTACCGAGACGATCCGGTTCTCTGCGGTAATGGGCTTCTTCTAG

Upstream 100 bases:

>100_bases
GCATGCGCATGCGCATGCGCAAACGCCTGTCGATAGCGCCGATATGTTGGACAACATGCTCTGATGTTTCCATCAGGTCA
CTAATACTTAGTCTGGCAAG

Downstream 100 bases:

>100_bases
TGGATTCTGTCCAAGGGGCCATTCGTTGAATCAATGTCGACAATTGATGCAACAGCGATTGGGCAGACATCCTATTACCC
CATGGGAGGGTAGAAATTTG

Product: putative conjugal transfer protein TrbL

Products: NA

Alternate protein names: Plasmid Conjugal Transfer Protein; Conjugal Transfer Protein

Number of amino acids: Translated: 48; Mature: 48

Protein sequence:

>48_residues
MLSYASWLFGSLVLLSMVWTYGMMASRKDDIQKFLTETIRFSAVMGFF

Sequences:

>Translated_48_residues
MLSYASWLFGSLVLLSMVWTYGMMASRKDDIQKFLTETIRFSAVMGFF
>Mature_48_residues
MLSYASWLFGSLVLLSMVWTYGMMASRKDDIQKFLTETIRFSAVMGFF

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5578; Mature: 5578

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
10.4 %Met     (Translated Protein)
10.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
10.4 %Met     (Mature Protein)
10.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYASWLFGSLVLLSMVWTYGMMASRKDDIQKFLTETIRFSAVMGFF
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSYASWLFGSLVLLSMVWTYGMMASRKDDIQKFLTETIRFSAVMGFF
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA