| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681776
Identifier: 182681776
GI number: 182681776
Start: 1371206
End: 1371352
Strand: Direct
Name: 182681776
Synonym: XfasM23_1234
Alternate gene names: NA
Gene position: 1371206-1371352 (Clockwise)
Preceding gene: 182681775
Following gene: 182681777
Centisome position: 54.08
GC content: 50.34
Gene sequence:
>147_bases ATGCTCAGCTACGCGTCCTGGCTGTTTGGGAGCTTAGTACTGCTGAGTATGGTCTGGACCTACGGAATGATGGCTTCACG TAAGGATGACATTCAGAAGTTTCTTACCGAGACGATCCGGTTCTCTGCGGTAATGGGCTTCTTCTAG
Upstream 100 bases:
>100_bases GCATGCGCATGCGCATGCGCAAACGCCTGTCGATAGCGCCGATATGTTGGACAACATGCTCTGATGTTTCCATCAGGTCA CTAATACTTAGTCTGGCAAG
Downstream 100 bases:
>100_bases TGGATTCTGTCCAAGGGGCCATTCGTTGAATCAATGTCGACAATTGATGCAACAGCGATTGGGCAGACATCCTATTACCC CATGGGAGGGTAGAAATTTG
Product: putative conjugal transfer protein TrbL
Products: NA
Alternate protein names: Plasmid Conjugal Transfer Protein; Conjugal Transfer Protein
Number of amino acids: Translated: 48; Mature: 48
Protein sequence:
>48_residues MLSYASWLFGSLVLLSMVWTYGMMASRKDDIQKFLTETIRFSAVMGFF
Sequences:
>Translated_48_residues MLSYASWLFGSLVLLSMVWTYGMMASRKDDIQKFLTETIRFSAVMGFF >Mature_48_residues MLSYASWLFGSLVLLSMVWTYGMMASRKDDIQKFLTETIRFSAVMGFF
Specific function: Unknown
COG id: COG3846
COG function: function code U; Type IV secretory pathway, TrbL components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5578; Mature: 5578
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 10.4 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 10.4 %Met (Mature Protein) 10.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSYASWLFGSLVLLSMVWTYGMMASRKDDIQKFLTETIRFSAVMGFF CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLSYASWLFGSLVLLSMVWTYGMMASRKDDIQKFLTETIRFSAVMGFF CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA