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The map label for this gene is ybfF [C]

Identifier: 182681759

GI number: 182681759

Start: 1350100

End: 1350924

Strand: Direct

Name: ybfF [C]

Synonym: XfasM23_1217

Alternate gene names: 182681759

Gene position: 1350100-1350924 (Clockwise)

Preceding gene: 182681758

Following gene: 182681763

Centisome position: 53.24

GC content: 52.36

Gene sequence:

>825_bases
TTGAATAAGATAGTACTGACCGCAGATACCACTGCAATCATCATCCCAGCGCTGAATGAAGCACTCAGCATCCGCAAAGT
CATCACCGACGCACTCGCGTATTGTCCACACGTGATCGTAGTCGATGATGGCTCAGACGATGGCACCGCTAACTGCATCT
CCGATCTGCCGATCATCCTGATACGACACCCACAACGCCGTGGTAAAGGTGCAGCACTGCGCAGTGGCTTCGCCGCAGCC
ACCCAACTGGGCGTACAAGGAGTAATCACCATGGATGGCGACGGCCAACATAGTGCTGCCGACTTCCCCCGCCTACTAGC
CGCAGCTAACTATCATCCTGGTTGTGTGATCATCGGTGCACGACTACGCAAGCGCTCCGAACAACCATGGATCCGACGCA
TAGGTAATCACTTCGGCGATTGGGGGATTAGCTGGGGTTGCGGCTGTCGCATTGTCGACACTCAAAGCGGGCAGCGCTTC
TATCCAGCCTCTGTATTTACCCTGCCCGATGTATCCGGAGAAGACTTCGTATTCGAGGCACAATTGTTGATCTCAGCTGC
ACGCCAAGCTGGCGCACGTATGATTGCTGTGCCAATAGAAGCGCGTTACAGCACTCCCCATTCGCCGAATATCTTTCGCA
AAAGTCATTTTCGAATGGTACGCGACTTTTGGAAAATCACCTCTCACGTTGCCATACAAATTTGGCGTTACGGTCATGTA
ATCCAAGAGTATCGGCGCACGCAAGCGCATCCGGTCGTTATCGATAATCCAGATGAAAGGATGCAGGCTGATCACGGATT
ACATATTCGTAATGCAGAAAGCTAA

Upstream 100 bases:

>100_bases
TGGCCCCAATGTTACCGTTGTTCGATGCACTGGCCAGCATAGATACAAAAACGGCGCTGTACGCCGGCACAAATCAGCTG
TTACATGTGGAATTACTGCG

Downstream 100 bases:

>100_bases
CACACGTCAATCCGTGCTCAATAGCAGATGAAACCATGTGTGCATATTGACATTGGAAAGGTGCACACATCCTATAAAAA
CGCAGGGAAGTTCAACCATC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MNKIVLTADTTAIIIPALNEALSIRKVITDALAYCPHVIVVDDGSDDGTANCISDLPIILIRHPQRRGKGAALRSGFAAA
TQLGVQGVITMDGDGQHSAADFPRLLAAANYHPGCVIIGARLRKRSEQPWIRRIGNHFGDWGISWGCGCRIVDTQSGQRF
YPASVFTLPDVSGEDFVFEAQLLISAARQAGARMIAVPIEARYSTPHSPNIFRKSHFRMVRDFWKITSHVAIQIWRYGHV
IQEYRRTQAHPVVIDNPDERMQADHGLHIRNAES

Sequences:

>Translated_274_residues
MNKIVLTADTTAIIIPALNEALSIRKVITDALAYCPHVIVVDDGSDDGTANCISDLPIILIRHPQRRGKGAALRSGFAAA
TQLGVQGVITMDGDGQHSAADFPRLLAAANYHPGCVIIGARLRKRSEQPWIRRIGNHFGDWGISWGCGCRIVDTQSGQRF
YPASVFTLPDVSGEDFVFEAQLLISAARQAGARMIAVPIEARYSTPHSPNIFRKSHFRMVRDFWKITSHVAIQIWRYGHV
IQEYRRTQAHPVVIDNPDERMQADHGLHIRNAES
>Mature_274_residues
MNKIVLTADTTAIIIPALNEALSIRKVITDALAYCPHVIVVDDGSDDGTANCISDLPIILIRHPQRRGKGAALRSGFAAA
TQLGVQGVITMDGDGQHSAADFPRLLAAANYHPGCVIIGARLRKRSEQPWIRRIGNHFGDWGISWGCGCRIVDTQSGQRF
YPASVFTLPDVSGEDFVFEAQLLISAARQAGARMIAVPIEARYSTPHSPNIFRKSHFRMVRDFWKITSHVAIQIWRYGHV
IQEYRRTQAHPVVIDNPDERMQADHGLHIRNAES

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 30365; Mature: 30365

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIVLTADTTAIIIPALNEALSIRKVITDALAYCPHVIVVDDGSDDGTANCISDLPIIL
CCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCCCCEEE
IRHPQRRGKGAALRSGFAAATQLGVQGVITMDGDGQHSAADFPRLLAAANYHPGCVIIGA
EECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEC
RLRKRSEQPWIRRIGNHFGDWGISWGCGCRIVDTQSGQRFYPASVFTLPDVSGEDFVFEA
HHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEECCEEEEECCCCCCCCEEEHH
QLLISAARQAGARMIAVPIEARYSTPHSPNIFRKSHFRMVRDFWKITSHVAIQIWRYGHV
HHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQEYRRTQAHPVVIDNPDERMQADHGLHIRNAES
HHHHHHCCCCCEEECCCHHHHHCCCCEEEECCCC
>Mature Secondary Structure
MNKIVLTADTTAIIIPALNEALSIRKVITDALAYCPHVIVVDDGSDDGTANCISDLPIIL
CCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCCCCEEE
IRHPQRRGKGAALRSGFAAATQLGVQGVITMDGDGQHSAADFPRLLAAANYHPGCVIIGA
EECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEC
RLRKRSEQPWIRRIGNHFGDWGISWGCGCRIVDTQSGQRFYPASVFTLPDVSGEDFVFEA
HHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEECCEEEEECCCCCCCCEEEHH
QLLISAARQAGARMIAVPIEARYSTPHSPNIFRKSHFRMVRDFWKITSHVAIQIWRYGHV
HHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQEYRRTQAHPVVIDNPDERMQADHGLHIRNAES
HHHHHHCCCCCEEECCCHHHHHCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]