| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is yafQ [C]
Identifier: 182681706
GI number: 182681706
Start: 1308023
End: 1308304
Strand: Direct
Name: yafQ [C]
Synonym: XfasM23_1164
Alternate gene names: 182681706
Gene position: 1308023-1308304 (Clockwise)
Preceding gene: 182681705
Following gene: 182681734
Centisome position: 51.58
GC content: 54.61
Gene sequence:
>282_bases ATGCGGAGGATTAGCCAGACTGGCCAATTCAAGCGCGACTACAAGCGCGAAGCTAAGGGCCAGCATCGCGCCACGCTTGA TGAGGAACTGATACACGTCTTGGAAGCCTTGACCTGTGATCATCCGTTGGAGCCACGCCACCACGATCACGCACTAACTG GCGACTGGAAAGATCACCGTGATTGCCACATCAAACCCGACTTGGTACTGATATACCGGAAGCCCGACAACGAGACATTG CAGCTCGTGCGCATTGGCTCACACAGCGAACTAGGTTTGTGA
Upstream 100 bases:
>100_bases CCGCTGGTGCCGAACGAAACTACCATCGCAGCCATGCGTGAAGCCCGTGCTGGTCACCTCAAGAGCTTTGATAGTATTGA GGCGCTCATGGCGGACTTGC
Downstream 100 bases:
>100_bases ACACTCCCAAGATCACGCGCCTTCATGCGTAACCGCCTACCCCTGTGCAGGGGTGGTAGGTGCATTGGGTCCTTGGGCCG TATGGTGGTGACGTTGTAGG
Product: addiction module antitoxin
Products: NA
Alternate protein names: Addiction Module Antitoxin; Addiction Module xin; Addiction Module xin Rele/Stbe Family; StbE/RelE-Family Protein; Plasmid Stabilisation System Protein; RelE xin-Like Protein; Plasmid Stabilization System Protein/Addiction Module xin; Addiction Module xin RelE/StbE Family Protein; Xin-Antitoxin System Toxin Component RelE Family
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MRRISQTGQFKRDYKREAKGQHRATLDEELIHVLEALTCDHPLEPRHHDHALTGDWKDHRDCHIKPDLVLIYRKPDNETL QLVRIGSHSELGL
Sequences:
>Translated_93_residues MRRISQTGQFKRDYKREAKGQHRATLDEELIHVLEALTCDHPLEPRHHDHALTGDWKDHRDCHIKPDLVLIYRKPDNETL QLVRIGSHSELGL >Mature_93_residues MRRISQTGQFKRDYKREAKGQHRATLDEELIHVLEALTCDHPLEPRHHDHALTGDWKDHRDCHIKPDLVLIYRKPDNETL QLVRIGSHSELGL
Specific function: Unknown
COG id: COG3041
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10937; Mature: 10937
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRISQTGQFKRDYKREAKGQHRATLDEELIHVLEALTCDHPLEPRHHDHALTGDWKDHR CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC DCHIKPDLVLIYRKPDNETLQLVRIGSHSELGL CCCCCCCEEEEEECCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MRRISQTGQFKRDYKREAKGQHRATLDEELIHVLEALTCDHPLEPRHHDHALTGDWKDHR CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC DCHIKPDLVLIYRKPDNETLQLVRIGSHSELGL CCCCCCCEEEEEECCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA