Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681636
Identifier: 182681636
GI number: 182681636
Start: 1238816
End: 1239667
Strand: Direct
Name: 182681636
Synonym: XfasM23_1094
Alternate gene names: NA
Gene position: 1238816-1239667 (Clockwise)
Preceding gene: 182681635
Following gene: 182681637
Centisome position: 48.86
GC content: 53.05
Gene sequence:
>852_bases ATGAAAAATAAGTTTACGCGCGTCTGCCTTTTCCTGCTGCTCTTAAGCTTAGTAGTGACAATAGCAACAGCAGCAACACC AGTCTGCCAATCACACTACCCATCACCCGCTGCAACCGAAGCCATGTTGACCATGGCTGATCGCACCGCCCAGCAACTGG ATGCGTTACCGGGCACACAGGTGGCAATCATCGCCCGCTATGGCCAGGATTTAAGCCGCTATGGCTTGCGTCACAGTCAC GTGGCCTTCGTCGTCCGCGAAGCGGATAGACAATGGCGTGTCCGCCACTTGCTGAATCATTGCAAGAGCCGTTATTCGGA ATTGTACCGTGAGGGGTTGGCTAACTTTATCGGCGAAACCGCACAAACCGGGGATCTGCGTCTGGGTGTTCTGGCGCCAT CGCTACAGCAGCGTTTGTATCCACTGCTGACCACTCAAAACGGCCTGATGCAACGCTTGCACGAGCCGCGCTACAGTGCG GTGGCCTATCCTTTTACTACTGGCTACCAGAACTCCAACCAATGGGTACTGGAGATCATCGCCGCAGCACTTGCCGCTGC TGATGGCCCAATACCAGACAACCGCAACAAAGTCCAAGCATGGCTACGCAAGGCACATTACAAACCTAGCAGCTTGCATC TAAGCCTCGGACAACGGTTTGGTGCGCGTTTCACCGTTACCAACGCAACGACCACAGATCATCCTTGGGGAGAGCGTATT TCTGGCAATTATTCCGTAGTCACCGTTGAATCCATATTCAACTTTTTATCAGAACGCGGCGTATTGATCGGCGATCAATC CATTGCGCATCAACCTCCTCCTTCCTCTTCAAACAGTGGAGCTTCACCATGA
Upstream 100 bases:
>100_bases CGCAGCCTCTACGAGAGACCGAACGCATCGCCAATGAAGTGCGTGCATGGTTTGGAGTCGTATAAGAGAGCTTTCAATCC AAGGACGAAGTGATCTCAAA
Downstream 100 bases:
>100_bases ATTATTCACGCCTTTTAGGCGCTTTCTTTTCATTGGGATCATTCGGAATGATTTTTTCGAGTCCCTCTGTGCATGCCAGT GACGCTATATCAGCCAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein; Exported Outer Membrane Protein
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKNKFTRVCLFLLLLSLVVTIATAATPVCQSHYPSPAATEAMLTMADRTAQQLDALPGTQVAIIARYGQDLSRYGLRHSH VAFVVREADRQWRVRHLLNHCKSRYSELYREGLANFIGETAQTGDLRLGVLAPSLQQRLYPLLTTQNGLMQRLHEPRYSA VAYPFTTGYQNSNQWVLEIIAAALAAADGPIPDNRNKVQAWLRKAHYKPSSLHLSLGQRFGARFTVTNATTTDHPWGERI SGNYSVVTVESIFNFLSERGVLIGDQSIAHQPPPSSSNSGASP
Sequences:
>Translated_283_residues MKNKFTRVCLFLLLLSLVVTIATAATPVCQSHYPSPAATEAMLTMADRTAQQLDALPGTQVAIIARYGQDLSRYGLRHSH VAFVVREADRQWRVRHLLNHCKSRYSELYREGLANFIGETAQTGDLRLGVLAPSLQQRLYPLLTTQNGLMQRLHEPRYSA VAYPFTTGYQNSNQWVLEIIAAALAAADGPIPDNRNKVQAWLRKAHYKPSSLHLSLGQRFGARFTVTNATTTDHPWGERI SGNYSVVTVESIFNFLSERGVLIGDQSIAHQPPPSSSNSGASP >Mature_283_residues MKNKFTRVCLFLLLLSLVVTIATAATPVCQSHYPSPAATEAMLTMADRTAQQLDALPGTQVAIIARYGQDLSRYGLRHSH VAFVVREADRQWRVRHLLNHCKSRYSELYREGLANFIGETAQTGDLRLGVLAPSLQQRLYPLLTTQNGLMQRLHEPRYSA VAYPFTTGYQNSNQWVLEIIAAALAAADGPIPDNRNKVQAWLRKAHYKPSSLHLSLGQRFGARFTVTNATTTDHPWGERI SGNYSVVTVESIFNFLSERGVLIGDQSIAHQPPPSSSNSGASP
Specific function: Unknown
COG id: COG4727
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31343; Mature: 31343
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKFTRVCLFLLLLSLVVTIATAATPVCQSHYPSPAATEAMLTMADRTAQQLDALPGTQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC VAIIARYGQDLSRYGLRHSHVAFVVREADRQWRVRHLLNHCKSRYSELYREGLANFIGET EEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AQTGDLRLGVLAPSLQQRLYPLLTTQNGLMQRLHEPRYSAVAYPFTTGYQNSNQWVLEII CCCCCEEEEEECHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCEECCCCCCCHHHHHHH AAALAAADGPIPDNRNKVQAWLRKAHYKPSSLHLSLGQRFGARFTVTNATTTDHPWGERI HHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHCCCEEEEECCCCCCCCCCCCC SGNYSVVTVESIFNFLSERGVLIGDQSIAHQPPPSSSNSGASP CCCEEEEEHHHHHHHHHHCCEEEECHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKNKFTRVCLFLLLLSLVVTIATAATPVCQSHYPSPAATEAMLTMADRTAQQLDALPGTQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC VAIIARYGQDLSRYGLRHSHVAFVVREADRQWRVRHLLNHCKSRYSELYREGLANFIGET EEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AQTGDLRLGVLAPSLQQRLYPLLTTQNGLMQRLHEPRYSAVAYPFTTGYQNSNQWVLEII CCCCCEEEEEECHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCEECCCCCCCHHHHHHH AAALAAADGPIPDNRNKVQAWLRKAHYKPSSLHLSLGQRFGARFTVTNATTTDHPWGERI HHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHCCCEEEEECCCCCCCCCCCCC SGNYSVVTVESIFNFLSERGVLIGDQSIAHQPPPSSSNSGASP CCCEEEEEHHHHHHHHHHCCEEEECHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA