Click here to switch to the map view.

The map label for this gene is yfdQ [H]

Identifier: 182681618

GI number: 182681618

Start: 1220562

End: 1221383

Strand: Direct

Name: yfdQ [H]

Synonym: XfasM23_1076

Alternate gene names: 182681618

Gene position: 1220562-1221383 (Clockwise)

Preceding gene: 182681617

Following gene: 182681619

Centisome position: 48.14

GC content: 46.23

Gene sequence:

>822_bases
ATGGACAAAACAGCCATAGAACATATTCAACAAACCGCCATTGATGCTAATAAATTCCGTTTACCGCCTGCATTACAGGA
TATCGCGGTAGCGATTCCAGATAACTATGACATCAGAAATCTCGAATCTTTCTACACATTACGCTCGCGTTTCCGTGGAG
AAATGAAAACCCAATCTATTACCGACTTCGTGCAGTACATCAAGACAAAAGGAAATGGCGAAGGTTTTATTAATGCAGAA
AATCTCAGTGCCAAGATATTTTTCAATCTCGGTACAACAGAATCACCCGGTCATGGCGACTGGACAGCCACGCTCACACT
TAACGCCACAGCAGCTTACAAAGCACTGCTGGATATTGACGGTAAAACACTCAATCAGCGGAAGTTGATTGATTTCCTGG
AAGATTGGGCACCGCTGCTGTCGGCCACATCACAAGAAAGCCTTGATGAACTACCGCTGACGACCGCGATTAACGCGATT
CGCAAATTAACTATCAAGAAAACCTCAGAGTCAGAATCAACTCAGGGCGAATTCAATACATCACGCTCCAAGTTCGATGA
TATCGAAGCCAAATCAGCTATTGGCTTACCGATTGGTTTCACCTTCAGGACCCAGCCGTATCTTGGATTACCGGAACGCA
GATTCCTGCTACGGCTGTCCGTATTTACCGACGAAGAAAAAGAAAAGCCACTCATCACACTGCGCCTCATACAGCGCCAA
GCACAGCAGGAAGCGATCGCCCAAGATTTTAAAAGCGTGTTGTTTCGTGCGCTTGAAGGACACGCCACGCTGACCATTGG
CACATTCTCCGCATCCCTTTAA

Upstream 100 bases:

>100_bases
ACGCGGCAAATTAACGCTCATCCCAGAGACACAACAGCAATTGTTCGCTGAAAAAAACTAGTCATCACCCATTAAATAAA
CTGAAAAAAGGAGCTGATTC

Downstream 100 bases:

>100_bases
CAGAGCGAAGCTGCCATGAACTCCCTGTCTGTCATCAAACCAAACAATGCCATGCCTATGACAGCCGAATACCGGCAGTC
GATCCGTACCGCATTGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MDKTAIEHIQQTAIDANKFRLPPALQDIAVAIPDNYDIRNLESFYTLRSRFRGEMKTQSITDFVQYIKTKGNGEGFINAE
NLSAKIFFNLGTTESPGHGDWTATLTLNATAAYKALLDIDGKTLNQRKLIDFLEDWAPLLSATSQESLDELPLTTAINAI
RKLTIKKTSESESTQGEFNTSRSKFDDIEAKSAIGLPIGFTFRTQPYLGLPERRFLLRLSVFTDEEKEKPLITLRLIQRQ
AQQEAIAQDFKSVLFRALEGHATLTIGTFSASL

Sequences:

>Translated_273_residues
MDKTAIEHIQQTAIDANKFRLPPALQDIAVAIPDNYDIRNLESFYTLRSRFRGEMKTQSITDFVQYIKTKGNGEGFINAE
NLSAKIFFNLGTTESPGHGDWTATLTLNATAAYKALLDIDGKTLNQRKLIDFLEDWAPLLSATSQESLDELPLTTAINAI
RKLTIKKTSESESTQGEFNTSRSKFDDIEAKSAIGLPIGFTFRTQPYLGLPERRFLLRLSVFTDEEKEKPLITLRLIQRQ
AQQEAIAQDFKSVLFRALEGHATLTIGTFSASL
>Mature_273_residues
MDKTAIEHIQQTAIDANKFRLPPALQDIAVAIPDNYDIRNLESFYTLRSRFRGEMKTQSITDFVQYIKTKGNGEGFINAE
NLSAKIFFNLGTTESPGHGDWTATLTLNATAAYKALLDIDGKTLNQRKLIDFLEDWAPLLSATSQESLDELPLTTAINAI
RKLTIKKTSESESTQGEFNTSRSKFDDIEAKSAIGLPIGFTFRTQPYLGLPERRFLLRLSVFTDEEKEKPLITLRLIQRQ
AQQEAIAQDFKSVLFRALEGHATLTIGTFSASL

Specific function: Unknown

COG id: COG5532

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788702, Length=275, Percent_Identity=38.1818181818182, Blast_Score=167, Evalue=9e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019276 [H]

Pfam domain/function: PF10065 DUF2303 [H]

EC number: NA

Molecular weight: Translated: 30599; Mature: 30599

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKTAIEHIQQTAIDANKFRLPPALQDIAVAIPDNYDIRNLESFYTLRSRFRGEMKTQSI
CCHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHH
TDFVQYIKTKGNGEGFINAENLSAKIFFNLGTTESPGHGDWTATLTLNATAAYKALLDID
HHHHHHHHHCCCCCEEEEECCCEEEEEEEECCCCCCCCCCEEEEEEEECHHHHHHHHCCC
GKTLNQRKLIDFLEDWAPLLSATSQESLDELPLTTAINAIRKLTIKKTSESESTQGEFNT
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SRSKFDDIEAKSAIGLPIGFTFRTQPYLGLPERRFLLRLSVFTDEEKEKPLITLRLIQRQ
CHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHH
AQQEAIAQDFKSVLFRALEGHATLTIGTFSASL
HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
>Mature Secondary Structure
MDKTAIEHIQQTAIDANKFRLPPALQDIAVAIPDNYDIRNLESFYTLRSRFRGEMKTQSI
CCHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHH
TDFVQYIKTKGNGEGFINAENLSAKIFFNLGTTESPGHGDWTATLTLNATAAYKALLDID
HHHHHHHHHCCCCCEEEEECCCEEEEEEEECCCCCCCCCCEEEEEEEECHHHHHHHHCCC
GKTLNQRKLIDFLEDWAPLLSATSQESLDELPLTTAINAIRKLTIKKTSESESTQGEFNT
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SRSKFDDIEAKSAIGLPIGFTFRTQPYLGLPERRFLLRLSVFTDEEKEKPLITLRLIQRQ
CHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHH
AQQEAIAQDFKSVLFRALEGHATLTIGTFSASL
HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]