| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681615
Identifier: 182681615
GI number: 182681615
Start: 1219665
End: 1219943
Strand: Direct
Name: 182681615
Synonym: XfasM23_1073
Alternate gene names: NA
Gene position: 1219665-1219943 (Clockwise)
Preceding gene: 182681614
Following gene: 182681616
Centisome position: 48.1
GC content: 51.97
Gene sequence:
>279_bases ATGTCACACCTGGATCACAATCGCAATTTCTGTATGGGTTATTGCAATCATCATAATAGGGTAGACATCTACGGCACCCC TGTACATTGCAGGAAGTGTGCGCCTCATTTATTTCTCGCGTCTGCCGACGACGTGAACGGCCCCCTCCGTGACTATCTCG ACTTGCGATATCGGCTCAGTCGTCCAGTAAGCCTCAGCGATCTGACGGAGGTGCTCAAGCGGATTAACTCCGGGAAGGAT GTCGAAATCGTAACACCCACGATGGATCCGATGCCCTGA
Upstream 100 bases:
>100_bases ATCCACCGCAAATAAATGCGAAACAACACGCATCCCAGCCCGCCACGTGCGGCGTGATTTGACACAAAAACCCCCGAGAT TTTTCGGTAAAGGAATTCCT
Downstream 100 bases:
>100_bases CTATCAAGCAGGAAACCCACCGATGAACCGCTATCGCACACCGAAAGAACAACACGCTGCACGTTGCAATGACTACGCGC ACCCTGGGTTAGCCAGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MSHLDHNRNFCMGYCNHHNRVDIYGTPVHCRKCAPHLFLASADDVNGPLRDYLDLRYRLSRPVSLSDLTEVLKRINSGKD VEIVTPTMDPMP
Sequences:
>Translated_92_residues MSHLDHNRNFCMGYCNHHNRVDIYGTPVHCRKCAPHLFLASADDVNGPLRDYLDLRYRLSRPVSLSDLTEVLKRINSGKD VEIVTPTMDPMP >Mature_91_residues SHLDHNRNFCMGYCNHHNRVDIYGTPVHCRKCAPHLFLASADDVNGPLRDYLDLRYRLSRPVSLSDLTEVLKRINSGKDV EIVTPTMDPMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10551; Mature: 10420
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHLDHNRNFCMGYCNHHNRVDIYGTPVHCRKCAPHLFLASADDVNGPLRDYLDLRYRLS CCCCCCCCCEEEEECCCCCEEEEEECCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCC RPVSLSDLTEVLKRINSGKDVEIVTPTMDPMP CCCCHHHHHHHHHHHCCCCCEEEECCCCCCCC >Mature Secondary Structure SHLDHNRNFCMGYCNHHNRVDIYGTPVHCRKCAPHLFLASADDVNGPLRDYLDLRYRLS CCCCCCCCEEEEECCCCCEEEEEECCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCC RPVSLSDLTEVLKRINSGKDVEIVTPTMDPMP CCCCHHHHHHHHHHHCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA