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The map label for this gene is ybgC [C]

Identifier: 182681491

GI number: 182681491

Start: 1111032

End: 1111457

Strand: Direct

Name: ybgC [C]

Synonym: XfasM23_0945

Alternate gene names: 182681491

Gene position: 1111032-1111457 (Clockwise)

Preceding gene: 182681490

Following gene: 182681492

Centisome position: 43.82

GC content: 50.23

Gene sequence:

>426_bases
ATGAGTAGCACTGTTACTCCACAGTTCAGTTGGATGACCCGTGTCTACTGGGAAGATACAGGTGCTGACGGTGTTGTTTA
TCATGCTCGCTACGTGGCTTTCATCGAACGGGCACGGACTGAATGGATGCGAACGATGGGATATGGACAAGAGCGTATGC
GTCAAGAGTACGATTTGGTGTTTGCTGTGCGTGCGATGCGTCTGGATTTTCTCCGCCCTGCGTATCTTGACGATGCGCTG
GAAGTGTCTGTGGCGTTGATCCATTGTAAGCATGCTAGCTTACTGTTGGCACAGTCGATCCGGCGTGACGGGGAGTTGTT
ACTTGAGGCGGAAGTTCAGCTTGCAGCATTATCGGCTAAACGTTTCCGTCCTCGTGCGATCAACAGTGCGCTATATGATC
GATTGAAGTCTTTAGAACTCTCATAA

Upstream 100 bases:

>100_bases
CCACAGATAAGGCCTACCAGCATCTCGCTCTGCAGCCTCGTGAGCGAGTTTCGGCTTTCACTGATCCAGAAGATTTGTTT
TGAACCATGAGAACTCCACT

Downstream 100 bases:

>100_bases
TCTGAATTACCGAGGAACAACGGATGATGACATGGCTCCTGGCCTTACAGGATACGGTGGAAGCTTTGCCGCAAGACATC
ACCGGGGTAGCAACTCAAGC

Product: tol-pal system-associated acyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSSTVTPQFSWMTRVYWEDTGADGVVYHARYVAFIERARTEWMRTMGYGQERMRQEYDLVFAVRAMRLDFLRPAYLDDAL
EVSVALIHCKHASLLLAQSIRRDGELLLEAEVQLAALSAKRFRPRAINSALYDRLKSLELS

Sequences:

>Translated_141_residues
MSSTVTPQFSWMTRVYWEDTGADGVVYHARYVAFIERARTEWMRTMGYGQERMRQEYDLVFAVRAMRLDFLRPAYLDDAL
EVSVALIHCKHASLLLAQSIRRDGELLLEAEVQLAALSAKRFRPRAINSALYDRLKSLELS
>Mature_140_residues
SSTVTPQFSWMTRVYWEDTGADGVVYHARYVAFIERARTEWMRTMGYGQERMRQEYDLVFAVRAMRLDFLRPAYLDDALE
VSVALIHCKHASLLLAQSIRRDGELLLEAEVQLAALSAKRFRPRAINSALYDRLKSLELS

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=132, Percent_Identity=40.9090909090909, Blast_Score=98, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 16350; Mature: 16219

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTVTPQFSWMTRVYWEDTGADGVVYHARYVAFIERARTEWMRTMGYGQERMRQEYDLV
CCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FAVRAMRLDFLRPAYLDDALEVSVALIHCKHASLLLAQSIRRDGELLLEAEVQLAALSAK
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
RFRPRAINSALYDRLKSLELS
HCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSTVTPQFSWMTRVYWEDTGADGVVYHARYVAFIERARTEWMRTMGYGQERMRQEYDLV
CCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FAVRAMRLDFLRPAYLDDALEVSVALIHCKHASLLLAQSIRRDGELLLEAEVQLAALSAK
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
RFRPRAINSALYDRLKSLELS
HCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]