| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is kup [H]
Identifier: 182681489
GI number: 182681489
Start: 1108018
End: 1109922
Strand: Direct
Name: kup [H]
Synonym: XfasM23_0943
Alternate gene names: 182681489
Gene position: 1108018-1109922 (Clockwise)
Preceding gene: 182681488
Following gene: 182681490
Centisome position: 43.7
GC content: 47.3
Gene sequence:
>1905_bases ATGTCTACCTCTTCTCATTCAGGTGATTGCGCAGCAATCACCTCTAATAGCAATAGTACCATCATACTTTCAGCAATCGG TGTCGTATTTGGTGATATCGGTACTAGTCCGCTATATACGTTGAAGGAGGCGTTTTCACCCAACTATGGCTTGGCTCCAA ACCATGACACGGTTTTGGGTATTCTGTCGTTAATCTTTTGGGCAATGATGTTAGTGGTAACAATTAAGTATGTGACTGTC ATTATGCGCGTCGATAATGACGGTGAGGGGGGCATCATGGCGTTGACTGCACTGACTCAGCGTACGATGCCATTTGGTAG CCGTTCGATCTACATTGTGGGTATTTTGGGCATCTTTGGTACTTCATTGTTTTTTGGCGATGGGATCATTACTCCGGCGA TCTCGGTGTTGTCAGCAGTTGAAGGTTTGGAAGTGGCTGAGCCTCATATGAAAGCGTTCGTAGTGCCGATTACTCTGGCA GTATTGATCTTACTTTTCCTTTGTCAGCGCTTCGGTACTGAACGTGTCGGTAAAACCTTTGGGCCGATTACTTTTCTTTG GTTCATTGCCATTGGTGTGGTTGGCGTATACAACATCATTCAGGCCCCAGAGGTACTATATGCGATTAATCCCTGGTGGG GACTGCATTTCTTCTTAGAACACGGTTGGCATTCAATGTTTGTGCTTGGCGCTGTTGTTCTTGCAGTGACTGGGGGTGAG GCACTTTATGCGGATATGGGCCATTTTGGAGCTAAAGCAATCCGCCATGCTTGGATGTATGTTGTGCTGCCGATGCTGGC TCTGAATTATCTTGGGCAAGGTGCATTGGTACTAAGCAATCCCACGGCGATCGGTAATCCTTTTTATCAGTCGATACCAG ATTGGGGGCTGTATCCGATGATTGCGCTTGCTACCGCTGCTGCCGTGATTGCTTCGCAAGCATTGATTACAGGGTCCTAC TCGCTTTCCAGTCAAGCGATGCAACTTGGCTATATCCCGCGCATGAATGTTCGTCATACTTCACAGTCCACAATTGGACA AATCTACGTACCAACGGTCAATTGGACTCTTCTGATGCTGGTCATCTTAACAGTGATCGGTTTTGGCGACTCGACCTCAA TGGCGAGTGCCTACGGTGTTGCAGTCACTGGAACAATGATGATTACTACCGTTTTAATGATTATCTATGCCCGCGCTAAT CCTCGCGTGCCGCGTCTGATGCTGTTGATGATTGCTATTGTGTTCATCGCAGTAGATGGTGCGTTCTTCTACGCTAACAT TATCAAGTTCATGGACGGTGCATGGTTTCCATTATTGCTTGGTGTGGTGATATTCACCTTTATGCGCACTTGGTTGCGTG GTCGTAAGTTGCTTCACGAGGAGATGCGCAAAGATGGGATCAATCTGGACAACTTTCTGCCTGGATTGATGCTTGCTCCG CCAGTAAAGGTGCCTGGTACTGCAGTATTCTTGACTGCTGATTCAACGGTGGTACCCCATGCGTTGATGCATAACCTTAA GCACAACAAGGTATTGCATGAGCGCAATGTGTTCTTGACTGTTAAAACGTTGAAGATACCTTACGCTGCCAACAGTGAGC GCTTGAAGATCGAGCCGATCAGCAACGGGTTTTATCGCGTCCATATACGCTTTGGTTTTATGGAAACACCGGATGTGCCA TCAGCGCTAATGTGTTCAAAGGATCATGCAGGAATTGACTTTGATCCGATGCATACGACGTTTTTCGTCAGCCGCGAAAC CGTTATTCCTAGTGCTAATCGAGGCATGCCGATCTGGCGCGACAAGCTATTCGTATTGATGCACCGTAATGCGGCACCAG CGAACGCATTTTTCAGAATCCCAGGAAACCGTTTGGTTGAACTTGGTACGCAAGTGGAAATCTGA
Upstream 100 bases:
>100_bases TGTTGCTATTGTCATCAAAAAAGCGCTTCAAACCGTATTACGTTGATCTTGGTTTATTTTCTACATTCACGTTATTAATG ATTAACTTTACTTATTAGCC
Downstream 100 bases:
>100_bases GTAATGTTTATTCTCTAGCATTTCCGATTCCGTACTCTCCTACCTTTCCTTACTTTATTTATGGATCGCATCATCGACAG CGCAGCCACCCGTGAGGATG
Product: K potassium transporter
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 634; Mature: 633
Protein sequence:
>634_residues MSTSSHSGDCAAITSNSNSTIILSAIGVVFGDIGTSPLYTLKEAFSPNYGLAPNHDTVLGILSLIFWAMMLVVTIKYVTV IMRVDNDGEGGIMALTALTQRTMPFGSRSIYIVGILGIFGTSLFFGDGIITPAISVLSAVEGLEVAEPHMKAFVVPITLA VLILLFLCQRFGTERVGKTFGPITFLWFIAIGVVGVYNIIQAPEVLYAINPWWGLHFFLEHGWHSMFVLGAVVLAVTGGE ALYADMGHFGAKAIRHAWMYVVLPMLALNYLGQGALVLSNPTAIGNPFYQSIPDWGLYPMIALATAAAVIASQALITGSY SLSSQAMQLGYIPRMNVRHTSQSTIGQIYVPTVNWTLLMLVILTVIGFGDSTSMASAYGVAVTGTMMITTVLMIIYARAN PRVPRLMLLMIAIVFIAVDGAFFYANIIKFMDGAWFPLLLGVVIFTFMRTWLRGRKLLHEEMRKDGINLDNFLPGLMLAP PVKVPGTAVFLTADSTVVPHALMHNLKHNKVLHERNVFLTVKTLKIPYAANSERLKIEPISNGFYRVHIRFGFMETPDVP SALMCSKDHAGIDFDPMHTTFFVSRETVIPSANRGMPIWRDKLFVLMHRNAAPANAFFRIPGNRLVELGTQVEI
Sequences:
>Translated_634_residues MSTSSHSGDCAAITSNSNSTIILSAIGVVFGDIGTSPLYTLKEAFSPNYGLAPNHDTVLGILSLIFWAMMLVVTIKYVTV IMRVDNDGEGGIMALTALTQRTMPFGSRSIYIVGILGIFGTSLFFGDGIITPAISVLSAVEGLEVAEPHMKAFVVPITLA VLILLFLCQRFGTERVGKTFGPITFLWFIAIGVVGVYNIIQAPEVLYAINPWWGLHFFLEHGWHSMFVLGAVVLAVTGGE ALYADMGHFGAKAIRHAWMYVVLPMLALNYLGQGALVLSNPTAIGNPFYQSIPDWGLYPMIALATAAAVIASQALITGSY SLSSQAMQLGYIPRMNVRHTSQSTIGQIYVPTVNWTLLMLVILTVIGFGDSTSMASAYGVAVTGTMMITTVLMIIYARAN PRVPRLMLLMIAIVFIAVDGAFFYANIIKFMDGAWFPLLLGVVIFTFMRTWLRGRKLLHEEMRKDGINLDNFLPGLMLAP PVKVPGTAVFLTADSTVVPHALMHNLKHNKVLHERNVFLTVKTLKIPYAANSERLKIEPISNGFYRVHIRFGFMETPDVP SALMCSKDHAGIDFDPMHTTFFVSRETVIPSANRGMPIWRDKLFVLMHRNAAPANAFFRIPGNRLVELGTQVEI >Mature_633_residues STSSHSGDCAAITSNSNSTIILSAIGVVFGDIGTSPLYTLKEAFSPNYGLAPNHDTVLGILSLIFWAMMLVVTIKYVTVI MRVDNDGEGGIMALTALTQRTMPFGSRSIYIVGILGIFGTSLFFGDGIITPAISVLSAVEGLEVAEPHMKAFVVPITLAV LILLFLCQRFGTERVGKTFGPITFLWFIAIGVVGVYNIIQAPEVLYAINPWWGLHFFLEHGWHSMFVLGAVVLAVTGGEA LYADMGHFGAKAIRHAWMYVVLPMLALNYLGQGALVLSNPTAIGNPFYQSIPDWGLYPMIALATAAAVIASQALITGSYS LSSQAMQLGYIPRMNVRHTSQSTIGQIYVPTVNWTLLMLVILTVIGFGDSTSMASAYGVAVTGTMMITTVLMIIYARANP RVPRLMLLMIAIVFIAVDGAFFYANIIKFMDGAWFPLLLGVVIFTFMRTWLRGRKLLHEEMRKDGINLDNFLPGLMLAPP VKVPGTAVFLTADSTVVPHALMHNLKHNKVLHERNVFLTVKTLKIPYAANSERLKIEPISNGFYRVHIRFGFMETPDVPS ALMCSKDHAGIDFDPMHTTFFVSRETVIPSANRGMPIWRDKLFVLMHRNAAPANAFFRIPGNRLVELGTQVEI
Specific function: Transport of potassium into the cell [H]
COG id: COG3158
COG function: function code P; K+ transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAK/KUP transporter (TC 2.A.72) family [H]
Homologues:
Organism=Escherichia coli, GI48994960, Length=624, Percent_Identity=48.7179487179487, Blast_Score=588, Evalue=1e-169,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003855 - InterPro: IPR023051 [H]
Pfam domain/function: PF02705 K_trans [H]
EC number: NA
Molecular weight: Translated: 69493; Mature: 69362
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSSHSGDCAAITSNSNSTIILSAIGVVFGDIGTSPLYTLKEAFSPNYGLAPNHDTVLG CCCCCCCCCEEEEECCCCCEEEEEEHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHH ILSLIFWAMMLVVTIKYVTVIMRVDNDGEGGIMALTALTQRTMPFGSRSIYIVGILGIFG HHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEHHHHHCCCCCCCCEEEEEEHHHHH TSLFFGDGIITPAISVLSAVEGLEVAEPHMKAFVVPITLAVLILLFLCQRFGTERVGKTF HHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHH GPITFLWFIAIGVVGVYNIIQAPEVLYAINPWWGLHFFLEHGWHSMFVLGAVVLAVTGGE HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHCCCCC ALYADMGHFGAKAIRHAWMYVVLPMLALNYLGQGALVLSNPTAIGNPFYQSIPDWGLYPM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCHHHH IALATAAAVIASQALITGSYSLSSQAMQLGYIPRMNVRHTSQSTIGQIYVPTVNWTLLML HHHHHHHHHHHHHHHEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHH VILTVIGFGDSTSMASAYGVAVTGTMMITTVLMIIYARANPRVPRLMLLMIAIVFIAVDG HHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCH AFFYANIIKFMDGAWFPLLLGVVIFTFMRTWLRGRKLLHEEMRKDGINLDNFLPGLMLAP HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCC PVKVPGTAVFLTADSTVVPHALMHNLKHNKVLHERNVFLTVKTLKIPYAANSERLKIEPI CCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEECCCEEEEEEEEEECCCCCCCCEEEEEC SNGFYRVHIRFGFMETPDVPSALMCSKDHAGIDFDPMHTTFFVSRETVIPSANRGMPIWR CCCEEEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCHH DKLFVLMHRNAAPANAFFRIPGNRLVELGTQVEI CCEEEEEECCCCCCCCEEECCCCHHEECCCCCCC >Mature Secondary Structure STSSHSGDCAAITSNSNSTIILSAIGVVFGDIGTSPLYTLKEAFSPNYGLAPNHDTVLG CCCCCCCCEEEEECCCCCEEEEEEHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHH ILSLIFWAMMLVVTIKYVTVIMRVDNDGEGGIMALTALTQRTMPFGSRSIYIVGILGIFG HHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEHHHHHCCCCCCCCEEEEEEHHHHH TSLFFGDGIITPAISVLSAVEGLEVAEPHMKAFVVPITLAVLILLFLCQRFGTERVGKTF HHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHH GPITFLWFIAIGVVGVYNIIQAPEVLYAINPWWGLHFFLEHGWHSMFVLGAVVLAVTGGE HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHCCCCC ALYADMGHFGAKAIRHAWMYVVLPMLALNYLGQGALVLSNPTAIGNPFYQSIPDWGLYPM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCHHHH IALATAAAVIASQALITGSYSLSSQAMQLGYIPRMNVRHTSQSTIGQIYVPTVNWTLLML HHHHHHHHHHHHHHHEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHH VILTVIGFGDSTSMASAYGVAVTGTMMITTVLMIIYARANPRVPRLMLLMIAIVFIAVDG HHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCH AFFYANIIKFMDGAWFPLLLGVVIFTFMRTWLRGRKLLHEEMRKDGINLDNFLPGLMLAP HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCC PVKVPGTAVFLTADSTVVPHALMHNLKHNKVLHERNVFLTVKTLKIPYAANSERLKIEPI CCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEECCCEEEEEEEEEECCCCCCCCEEEEEC SNGFYRVHIRFGFMETPDVPSALMCSKDHAGIDFDPMHTTFFVSRETVIPSANRGMPIWR CCCEEEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCHH DKLFVLMHRNAAPANAFFRIPGNRLVELGTQVEI CCEEEEEECCCCCCCCEEECCCCHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]