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The map label for this gene is yebC [C]

Identifier: 182681486

GI number: 182681486

Start: 1105918

End: 1106652

Strand: Direct

Name: yebC [C]

Synonym: XfasM23_0940

Alternate gene names: 182681486

Gene position: 1105918-1106652 (Clockwise)

Preceding gene: 182681485

Following gene: 182681487

Centisome position: 43.61

GC content: 47.76

Gene sequence:

>735_bases
ATGGGTCGAGGCCCCTCAATTGAAGCTCGTAAAAATGCTTCTGACAGCAAACGCGGCAAGATTTTCACTAAGATCATTCG
TCAAATTGGTGTCGCTGCTCGTGCTGGTGGTGGTGATCCCTCTAACAATCCAAGTTTGCGTGTGGTGATAGACAAGGCAT
TGGCGTCGAATATGTCCAAGGATGTTATTGAACGCGCAATAAAGAAGGCTATTGGTGAGATGGAGGGCGTTCAATACGAG
GAAGTACGTTACGAGGGCTATGCTCCAGGGGGAGTTGCAGTCATTGTTGACTGTCTGACTGACAATCGGCTGCGTACTGT
GTCTGATGTGCGCCATGCTTTCTCCAAATGTGGAGGTAATATGGGGACTGAAGGTTCGGTTGCCTTCATGTTCAAGCGTT
TGGGGGTACTCAGCTACGCTCATGCCATTGCTGATGAAGAGCGTATCACAGAGGCAGCAATTGATGCTGGTGCTGAAGAT
GTAATGGTCTACATAGAAGATGATGAGATTGAGGTCATAACTACTCCAGAAGCTTTCTCACGTGTTAAGGAAGAGATGGC
TGCGTTAGGTTTGATGCCGTATCATGCTGAGATTACTTTCCGTGCCGATAGTGACATTGTGGTGGATGGGGATACTGCAA
TACAGGTACGTAAGCTCCTGGATATACTGGAAGACTTGGATGATGTTCAGGACGTGTATTCCAACGTTGATCAAGTGACG
TTGGGCAAGCGTTGA

Upstream 100 bases:

>100_bases
TTCTTTGAAGGATGCGGAGGTGGCCTGAGCAGTTCTTACACCGCATAGATACTTGGGCAGCTATAATTACGTTTCCATTA
TCAACGCACTCCTGAAGGCC

Downstream 100 bases:

>100_bases
GATGAATACTTACAAGATCCATCGCAATGTTGATTGCTATGGATACGCTCCATCTTTGTCTTAACTGTTCTTCCATCATT
GATCACTTTGTCTTAATGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MGRGPSIEARKNASDSKRGKIFTKIIRQIGVAARAGGGDPSNNPSLRVVIDKALASNMSKDVIERAIKKAIGEMEGVQYE
EVRYEGYAPGGVAVIVDCLTDNRLRTVSDVRHAFSKCGGNMGTEGSVAFMFKRLGVLSYAHAIADEERITEAAIDAGAED
VMVYIEDDEIEVITTPEAFSRVKEEMAALGLMPYHAEITFRADSDIVVDGDTAIQVRKLLDILEDLDDVQDVYSNVDQVT
LGKR

Sequences:

>Translated_244_residues
MGRGPSIEARKNASDSKRGKIFTKIIRQIGVAARAGGGDPSNNPSLRVVIDKALASNMSKDVIERAIKKAIGEMEGVQYE
EVRYEGYAPGGVAVIVDCLTDNRLRTVSDVRHAFSKCGGNMGTEGSVAFMFKRLGVLSYAHAIADEERITEAAIDAGAED
VMVYIEDDEIEVITTPEAFSRVKEEMAALGLMPYHAEITFRADSDIVVDGDTAIQVRKLLDILEDLDDVQDVYSNVDQVT
LGKR
>Mature_243_residues
GRGPSIEARKNASDSKRGKIFTKIIRQIGVAARAGGGDPSNNPSLRVVIDKALASNMSKDVIERAIKKAIGEMEGVQYEE
VRYEGYAPGGVAVIVDCLTDNRLRTVSDVRHAFSKCGGNMGTEGSVAFMFKRLGVLSYAHAIADEERITEAAIDAGAEDV
MVYIEDDEIEVITTPEAFSRVKEEMAALGLMPYHAEITFRADSDIVVDGDTAIQVRKLLDILEDLDDVQDVYSNVDQVTL
GKR

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=234, Percent_Identity=28.6324786324786, Blast_Score=97, Evalue=9e-21,
Organism=Escherichia coli, GI1788171, Length=226, Percent_Identity=50.4424778761062, Blast_Score=235, Evalue=2e-63,
Organism=Escherichia coli, GI1788294, Length=238, Percent_Identity=35.7142857142857, Blast_Score=123, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6321458, Length=259, Percent_Identity=33.2046332046332, Blast_Score=107, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24583305, Length=246, Percent_Identity=24.7967479674797, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26558; Mature: 26427

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRGPSIEARKNASDSKRGKIFTKIIRQIGVAARAGGGDPSNNPSLRVVIDKALASNMSK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHCCCHH
DVIERAIKKAIGEMEGVQYEEVRYEGYAPGGVAVIVDCLTDNRLRTVSDVRHAFSKCGGN
HHHHHHHHHHHHHHCCCCHHHHEECCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHCCC
MGTEGSVAFMFKRLGVLSYAHAIADEERITEAAIDAGAEDVMVYIEDDEIEVITTPEAFS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECHHHHH
RVKEEMAALGLMPYHAEITFRADSDIVVDGDTAIQVRKLLDILEDLDDVQDVYSNVDQVT
HHHHHHHHHCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHC
LGKR
CCCC
>Mature Secondary Structure 
GRGPSIEARKNASDSKRGKIFTKIIRQIGVAARAGGGDPSNNPSLRVVIDKALASNMSK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHCCCHH
DVIERAIKKAIGEMEGVQYEEVRYEGYAPGGVAVIVDCLTDNRLRTVSDVRHAFSKCGGN
HHHHHHHHHHHHHHCCCCHHHHEECCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHCCC
MGTEGSVAFMFKRLGVLSYAHAIADEERITEAAIDAGAEDVMVYIEDDEIEVITTPEAFS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECHHHHH
RVKEEMAALGLMPYHAEITFRADSDIVVDGDTAIQVRKLLDILEDLDDVQDVYSNVDQVT
HHHHHHHHHCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHC
LGKR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA