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The map label for this gene is ftsY [H]

Identifier: 182681482

GI number: 182681482

Start: 1102553

End: 1103746

Strand: Direct

Name: ftsY [H]

Synonym: XfasM23_0936

Alternate gene names: 182681482

Gene position: 1102553-1103746 (Clockwise)

Preceding gene: 182681479

Following gene: 182681483

Centisome position: 43.48

GC content: 49.58

Gene sequence:

>1194_bases
ATGTTAAGCTTTCTACGCCGCAAGAAGCCCACCAATGCCATCAGCGACAACGAGCGGAGCAAATACAGTGCTGAAGAGAT
GGCTGCTGCCTTTCCAAAAGCTCCTTCGTTGGATGAGGCTCCAGACCAAGGGCAAACTAGCACCACGCCATTGCTATCTT
CAGCAGATCAGCCTGCGTTACTGACCCACTCTACGAGTAGTGCCTTTACAGAGCTAGTAATCTCCACTTGCAACGACACA
TCGGGGGCGAGTACCCCAACAGTTTCGGTGGATAAACCCAATTGGCGTGAGCGCCTACGTGGCAGTCTCTTCGCGCGGAA
CATCAATGCTTTATTCTCGAATAACCCGCGTTTGGATGAAAATCTGCTTGATGAGATTGAAACCGCGTTGATTACGGCTG
ATGTAGGCGTGTCTACGACTAATGCAATAGTTGACGGTTTGCGTAAACGTATGAAAGCACGTGAATTCGCTGATATCCAA
ACACTGTTAGCTGCATTACGTAATGAATTAATCACGATACTGCGTCCTGTTTCTAAACCACTGATCGTCAAACGCGATGC
ACTTCCATTTGTGTTTCTTGTTGTAGGTGTCAATGGTGTTGGTAAGACTACAACAATCGGCAAGTTGGCGAAGTGGTTCA
AGAGGGATGGCTACAGCTTGATGTTGGCTGCCGGTGATACCTTCCGTGCTGCCGCTGTCGCGCAGTTACAGGCATGGGGC
GAGCGTAATAGTATTACGGTGATCGCACAAAAAGGACCGAATGCAGATGCTGCTTCGGTAGTCTATGATGCGCTGCAAGC
AGCCAAGGCGCGTAGCATTGAGGTGCTCATCGCCGATACCGCAGGCCGCCTGCATACCCAAATTGGTTTAATGAACGAGT
TGAGCAAAATCCGCCGTGTGCTCGGTAAGCTTGATAGCACCGCACCACATGAAGTACTGATGGTGATTGACGGTACTACT
GGGCAAAATGCGCTTTCGCAATTACGCCAATTTCATGCTGCCGTGAACGTCACTGGTATTGTGGTAACCAAGCTTGATGG
CACTGCCAAGGGCGGGGTAGTCTTCACGTTGGCACGTGAATTTGGCATTCCAATCCACTTCATCAGCATAGGCGAGCAGC
TGGAAGATATGCATTTTTTTGACCCTGAGGCATTCGTAGACGCGCTACTGCCAAAAACATTAGGAAATGCTTAA

Upstream 100 bases:

>100_bases
TGATCAAAAATCTATAAGACTTTATTTGTTGTCGCGAGGTGCAGACCTCCGGTGAGTGATACCATGGTGGCTTGTTTAAG
TCCGCATATGCATCTGCTCA

Downstream 100 bases:

>100_bases
GATATCTGGACACGTCTTCCCGCATGCAAGCCCGCACATTTTCAGGTAATGCCATAGAGTCCCTACTCACTTAGCTTACC
CACTCGCAGGCCAGCCTACA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MLSFLRRKKPTNAISDNERSKYSAEEMAAAFPKAPSLDEAPDQGQTSTTPLLSSADQPALLTHSTSSAFTELVISTCNDT
SGASTPTVSVDKPNWRERLRGSLFARNINALFSNNPRLDENLLDEIETALITADVGVSTTNAIVDGLRKRMKAREFADIQ
TLLAALRNELITILRPVSKPLIVKRDALPFVFLVVGVNGVGKTTTIGKLAKWFKRDGYSLMLAAGDTFRAAAVAQLQAWG
ERNSITVIAQKGPNADAASVVYDALQAAKARSIEVLIADTAGRLHTQIGLMNELSKIRRVLGKLDSTAPHEVLMVIDGTT
GQNALSQLRQFHAAVNVTGIVVTKLDGTAKGGVVFTLAREFGIPIHFISIGEQLEDMHFFDPEAFVDALLPKTLGNA

Sequences:

>Translated_397_residues
MLSFLRRKKPTNAISDNERSKYSAEEMAAAFPKAPSLDEAPDQGQTSTTPLLSSADQPALLTHSTSSAFTELVISTCNDT
SGASTPTVSVDKPNWRERLRGSLFARNINALFSNNPRLDENLLDEIETALITADVGVSTTNAIVDGLRKRMKAREFADIQ
TLLAALRNELITILRPVSKPLIVKRDALPFVFLVVGVNGVGKTTTIGKLAKWFKRDGYSLMLAAGDTFRAAAVAQLQAWG
ERNSITVIAQKGPNADAASVVYDALQAAKARSIEVLIADTAGRLHTQIGLMNELSKIRRVLGKLDSTAPHEVLMVIDGTT
GQNALSQLRQFHAAVNVTGIVVTKLDGTAKGGVVFTLAREFGIPIHFISIGEQLEDMHFFDPEAFVDALLPKTLGNA
>Mature_397_residues
MLSFLRRKKPTNAISDNERSKYSAEEMAAAFPKAPSLDEAPDQGQTSTTPLLSSADQPALLTHSTSSAFTELVISTCNDT
SGASTPTVSVDKPNWRERLRGSLFARNINALFSNNPRLDENLLDEIETALITADVGVSTTNAIVDGLRKRMKAREFADIQ
TLLAALRNELITILRPVSKPLIVKRDALPFVFLVVGVNGVGKTTTIGKLAKWFKRDGYSLMLAAGDTFRAAAVAQLQAWG
ERNSITVIAQKGPNADAASVVYDALQAAKARSIEVLIADTAGRLHTQIGLMNELSKIRRVLGKLDSTAPHEVLMVIDGTT
GQNALSQLRQFHAAVNVTGIVVTKLDGTAKGGVVFTLAREFGIPIHFISIGEQLEDMHFFDPEAFVDALLPKTLGNA

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane. Binds to the ribosome in the presence of the SRP particle and a non-hydrolyzable GTP analog. This abolishes trigger f

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=289, Percent_Identity=29.4117647058824, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI295424842, Length=381, Percent_Identity=27.5590551181102, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI23308697, Length=381, Percent_Identity=27.5590551181102, Blast_Score=119, Evalue=6e-27,
Organism=Homo sapiens, GI226371618, Length=229, Percent_Identity=31.0043668122271, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=29.6296296296296, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI1789874, Length=299, Percent_Identity=54.5150501672241, Blast_Score=300, Evalue=8e-83,
Organism=Escherichia coli, GI1788963, Length=310, Percent_Identity=30.6451612903226, Blast_Score=136, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17539958, Length=273, Percent_Identity=29.3040293040293, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI193206261, Length=297, Percent_Identity=29.6296296296296, Blast_Score=118, Evalue=5e-27,
Organism=Saccharomyces cerevisiae, GI6325345, Length=280, Percent_Identity=28.2142857142857, Blast_Score=124, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6320498, Length=230, Percent_Identity=25.6521739130435, Blast_Score=91, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17647949, Length=275, Percent_Identity=30.5454545454545, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24641198, Length=301, Percent_Identity=27.2425249169435, Blast_Score=114, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 42821; Mature: 42821

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSFLRRKKPTNAISDNERSKYSAEEMAAAFPKAPSLDEAPDQGQTSTTPLLSSADQPAL
CCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCEE
LTHSTSSAFTELVISTCNDTSGASTPTVSVDKPNWRERLRGSLFARNINALFSNNPRLDE
EEECCHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH
NLLDEIETALITADVGVSTTNAIVDGLRKRMKAREFADIQTLLAALRNELITILRPVSKP
HHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LIVKRDALPFVFLVVGVNGVGKTTTIGKLAKWFKRDGYSLMLAAGDTFRAAAVAQLQAWG
EEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCC
ERNSITVIAQKGPNADAASVVYDALQAAKARSIEVLIADTAGRLHTQIGLMNELSKIRRV
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
LGKLDSTAPHEVLMVIDGTTGQNALSQLRQFHAAVNVTGIVVTKLDGTAKGGVVFTLARE
HHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCEEEEEHHH
FGIPIHFISIGEQLEDMHFFDPEAFVDALLPKTLGNA
HCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSFLRRKKPTNAISDNERSKYSAEEMAAAFPKAPSLDEAPDQGQTSTTPLLSSADQPAL
CCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCEE
LTHSTSSAFTELVISTCNDTSGASTPTVSVDKPNWRERLRGSLFARNINALFSNNPRLDE
EEECCHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH
NLLDEIETALITADVGVSTTNAIVDGLRKRMKAREFADIQTLLAALRNELITILRPVSKP
HHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LIVKRDALPFVFLVVGVNGVGKTTTIGKLAKWFKRDGYSLMLAAGDTFRAAAVAQLQAWG
EEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCC
ERNSITVIAQKGPNADAASVVYDALQAAKARSIEVLIADTAGRLHTQIGLMNELSKIRRV
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
LGKLDSTAPHEVLMVIDGTTGQNALSQLRQFHAAVNVTGIVVTKLDGTAKGGVVFTLARE
HHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCEEEEEHHH
FGIPIHFISIGEQLEDMHFFDPEAFVDALLPKTLGNA
HCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3025556; 8041620; 9278503; 2161989; 8194520; 9002525 [H]