| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681456
Identifier: 182681456
GI number: 182681456
Start: 1077780
End: 1078274
Strand: Direct
Name: 182681456
Synonym: XfasM23_0907
Alternate gene names: NA
Gene position: 1077780-1078274 (Clockwise)
Preceding gene: 182681455
Following gene: 182681457
Centisome position: 42.5
GC content: 44.24
Gene sequence:
>495_bases GTGTATCGTATCTTGCTCTCTCTATCACTTTCATTCTTTGCCTTTCCGGTTTTTGCAGGCAACGTAAAGTGCTACAAAGG AAATGCGCCATTGGTTTCCAACGTTGAGGAACGTGAGGTTGCTCAACTGTTTGATCGTTGGAATGCTGCCTTAACCACAG GAAATCCAAATAATGTTGCTGAGTTGTACACACCAGATGCTGTGCTGTTGCCAACCATGTCTAACCAGGTCCGTAGCACT CCAGCTGAAATTCTTGACTACTTTAAGTACTTTTTAGAATTTAAACCTCACGGATACATTAACTACCGTAAAGTGAATCT TCTGGACAAGAACAATGCATTGGATGCTGGTGTCTATACCTTCGTTTTGACCAACAAGGATGGCAGCAAACGTAACGTGC AGGCACGCTACAGCTTCGCTTACACTAAGAGTGATGGAAAGTGGCTGATCGTTAATCACCATAGCTCAGCGATGCCAGAG GGTAAATGCCCCTAA
Upstream 100 bases:
>100_bases CTAGTGTTGTTGGATTGGATTTAATCTTAATTTGGTGCTCTGGAAAACGTTAAATCTTTTAGCTAAGCTAATTACGATAA ATAATTCAGGGTGATCTCCC
Downstream 100 bases:
>100_bases TGGTCGGTATCTGTGCCGTGTTTCCGTTTCGCGTTGTAACAGGGTTTGCAAGCCTGTCTGCACATTGCTGCACAGCATGA ACATATTCGATCGAGGTTAC
Product: calcium/calmodulin dependent protein kinase II association-domain-containing protein
Products: NA
Alternate protein names: Kinase; Protein With A Cystatin-Like Fold; Secreted Protein; Exported Protein
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MYRILLSLSLSFFAFPVFAGNVKCYKGNAPLVSNVEEREVAQLFDRWNAALTTGNPNNVAELYTPDAVLLPTMSNQVRST PAEILDYFKYFLEFKPHGYINYRKVNLLDKNNALDAGVYTFVLTNKDGSKRNVQARYSFAYTKSDGKWLIVNHHSSAMPE GKCP
Sequences:
>Translated_164_residues MYRILLSLSLSFFAFPVFAGNVKCYKGNAPLVSNVEEREVAQLFDRWNAALTTGNPNNVAELYTPDAVLLPTMSNQVRST PAEILDYFKYFLEFKPHGYINYRKVNLLDKNNALDAGVYTFVLTNKDGSKRNVQARYSFAYTKSDGKWLIVNHHSSAMPE GKCP >Mature_164_residues MYRILLSLSLSFFAFPVFAGNVKCYKGNAPLVSNVEEREVAQLFDRWNAALTTGNPNNVAELYTPDAVLLPTMSNQVRST PAEILDYFKYFLEFKPHGYINYRKVNLLDKNNALDAGVYTFVLTNKDGSKRNVQARYSFAYTKSDGKWLIVNHHSSAMPE GKCP
Specific function: Unknown
COG id: COG4875
COG function: function code S; Uncharacterized protein conserved in bacteria with a cystatin-like fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18571; Mature: 18571
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRILLSLSLSFFAFPVFAGNVKCYKGNAPLVSNVEEREVAQLFDRWNAALTTGNPNNVA CEEEEEEHHHHHHHHEEEECCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCEE ELYTPDAVLLPTMSNQVRSTPAEILDYFKYFLEFKPHGYINYRKVNLLDKNNALDAGVYT EEECCCEEEECCCCCHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCEEE FVLTNKDGSKRNVQARYSFAYTKSDGKWLIVNHHSSAMPEGKCP EEEECCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MYRILLSLSLSFFAFPVFAGNVKCYKGNAPLVSNVEEREVAQLFDRWNAALTTGNPNNVA CEEEEEEHHHHHHHHEEEECCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCEE ELYTPDAVLLPTMSNQVRSTPAEILDYFKYFLEFKPHGYINYRKVNLLDKNNALDAGVYT EEECCCEEEECCCCCHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCEEE FVLTNKDGSKRNVQARYSFAYTKSDGKWLIVNHHSSAMPEGKCP EEEECCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA