| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is gshB [H]
Identifier: 182681441
GI number: 182681441
Start: 1056278
End: 1057222
Strand: Reverse
Name: gshB [H]
Synonym: XfasM23_0892
Alternate gene names: 182681441
Gene position: 1057222-1056278 (Counterclockwise)
Preceding gene: 182681448
Following gene: 182681440
Centisome position: 41.69
GC content: 53.76
Gene sequence:
>945_bases ATGCCGTTGGACGTCGTTGTTGTGATGGACCCCATCACAGGTATCAAAATCGCCAAAGACACCACCTTTGCATTGCTGCT GGAGGCGCAGCGTCGCAGCCATCGCCTTCATTATGTGCACCCTGGTAGCCTCAGCTTAAATGAGGGGCGTACCTTCGCGC AAACCGCACCGCTTCAAGTACGCGACAACAAGACCGACTGGTACACCTTGGGGGAGTTCAGCGAGACTCAACTCGGCCAA GGGCAAATAATCCTGATGCGTAAAGATCCTCCAGTCAATGCTGAATTCATCTACGACACACAGTTGCTTAGTATCGCCCA AGCCGCTGGTGCTCAAGTGATTAACCACCCACAGGGCCTACGCGATCTCAACGAGAAAATAGCCGCGCAGCTATTCCCAC AATGTTGCCCACCAACTCTTATTAGCCGTGATATGAGAGCACTGAAGATGTTTGTTCAGAAGCAAGAGCAAGCGATTCTC AAGCCACTAGACGGGATGGGTGGGCATTCGATATTTCGCAGTAGCAACGGCGACCCCAATCTCAATGTGATCCTGGAAAC GTTGACAGATGGCGGACGCACACTGGCAATAGCGCAACGCTATCTGCAACAAATTATCGAAGGCGACAAACGCATCCTAC TGATTGACGGAGTCCCTATAGACCATTGTTTGGCTAGAATCCCACAAGGTGACGAATTCCGCGGCAACATGGCTGCTGGA GGCCGCGGTGAGAGCCGCCCCCTCAACGAACGCGACCGCTGGATCGCCGCTCAAGTCGGGCCAGAGATGCGACGCCGTGG CATGCGTTTTGTCGGAATCGACGTGATCGGCGACTACTTGACTGAGATAAACGTCACAAGCCCCACCTGCCTACGCGAAT TAGACGCACAGTGCGGCCTGAACATCGCTGGACAACTGTTCGATGCAATTGAAACTGGAGGCTGA
Upstream 100 bases:
>100_bases AGCATCGCATGCAAGCACCATATAGGGCAAAACAGGCACACTATTAGCTCCCTAAACTCGCTAACATCGGCATCTCTGTT TCAAATCAGGTTGACCTTTA
Downstream 100 bases:
>100_bases TATGGATGCGGTCAATACAGCCCAAATCCGGGAACGTCAACGTCTGAACACAACACTGGTTCTGTCGATTCTCATACACC TTGCGCTGATTCTAGGAGTA
Product: glutathione synthetase
Products: NA
Alternate protein names: GSH synthetase; GSH-S; GSHase; Glutathione synthase [H]
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPLDVVVVMDPITGIKIAKDTTFALLLEAQRRSHRLHYVHPGSLSLNEGRTFAQTAPLQVRDNKTDWYTLGEFSETQLGQ GQIILMRKDPPVNAEFIYDTQLLSIAQAAGAQVINHPQGLRDLNEKIAAQLFPQCCPPTLISRDMRALKMFVQKQEQAIL KPLDGMGGHSIFRSSNGDPNLNVILETLTDGGRTLAIAQRYLQQIIEGDKRILLIDGVPIDHCLARIPQGDEFRGNMAAG GRGESRPLNERDRWIAAQVGPEMRRRGMRFVGIDVIGDYLTEINVTSPTCLRELDAQCGLNIAGQLFDAIETGG
Sequences:
>Translated_314_residues MPLDVVVVMDPITGIKIAKDTTFALLLEAQRRSHRLHYVHPGSLSLNEGRTFAQTAPLQVRDNKTDWYTLGEFSETQLGQ GQIILMRKDPPVNAEFIYDTQLLSIAQAAGAQVINHPQGLRDLNEKIAAQLFPQCCPPTLISRDMRALKMFVQKQEQAIL KPLDGMGGHSIFRSSNGDPNLNVILETLTDGGRTLAIAQRYLQQIIEGDKRILLIDGVPIDHCLARIPQGDEFRGNMAAG GRGESRPLNERDRWIAAQVGPEMRRRGMRFVGIDVIGDYLTEINVTSPTCLRELDAQCGLNIAGQLFDAIETGG >Mature_313_residues PLDVVVVMDPITGIKIAKDTTFALLLEAQRRSHRLHYVHPGSLSLNEGRTFAQTAPLQVRDNKTDWYTLGEFSETQLGQG QIILMRKDPPVNAEFIYDTQLLSIAQAAGAQVINHPQGLRDLNEKIAAQLFPQCCPPTLISRDMRALKMFVQKQEQAILK PLDGMGGHSIFRSSNGDPNLNVILETLTDGGRTLAIAQRYLQQIIEGDKRILLIDGVPIDHCLARIPQGDEFRGNMAAGG RGESRPLNERDRWIAAQVGPEMRRRGMRFVGIDVIGDYLTEINVTSPTCLRELDAQCGLNIAGQLFDAIETGG
Specific function: Glutathione biosynthesis; second step. [C]
COG id: COG0189
COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1789316, Length=305, Percent_Identity=53.4426229508197, Blast_Score=334, Evalue=5e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR006284 - InterPro: IPR004218 - InterPro: IPR004215 - InterPro: IPR013817 - InterPro: IPR016185 [H]
Pfam domain/function: PF02955 GSH-S_ATP; PF02951 GSH-S_N [H]
EC number: =6.3.2.3 [H]
Molecular weight: Translated: 34735; Mature: 34604
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDVVVVMDPITGIKIAKDTTFALLLEAQRRSHRLHYVHPGSLSLNEGRTFAQTAPLQV CCEEEEEEECCCCCEEEECCCHHHHHHHHHHHCCCEEEECCCCEECCCCCEEEECCCEEE RDNKTDWYTLGEFSETQLGQGQIILMRKDPPVNAEFIYDTQLLSIAQAAGAQVINHPQGL ECCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHCHHHHCCCHHH RDLNEKIAAQLFPQCCPPTLISRDMRALKMFVQKQEQAILKPLDGMGGHSIFRSSNGDPN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC LNVILETLTDGGRTLAIAQRYLQQIIEGDKRILLIDGVPIDHCLARIPQGDEFRGNMAAG CEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCC GRGESRPLNERDRWIAAQVGPEMRRRGMRFVGIDVIGDYLTEINVTSPTCLRELDAQCGL CCCCCCCCCHHHCEEEECCCHHHHHCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHCCC NIAGQLFDAIETGG CHHHHHHHHHHCCC >Mature Secondary Structure PLDVVVVMDPITGIKIAKDTTFALLLEAQRRSHRLHYVHPGSLSLNEGRTFAQTAPLQV CEEEEEEECCCCCEEEECCCHHHHHHHHHHHCCCEEEECCCCEECCCCCEEEECCCEEE RDNKTDWYTLGEFSETQLGQGQIILMRKDPPVNAEFIYDTQLLSIAQAAGAQVINHPQGL ECCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHCHHHHCCCHHH RDLNEKIAAQLFPQCCPPTLISRDMRALKMFVQKQEQAILKPLDGMGGHSIFRSSNGDPN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC LNVILETLTDGGRTLAIAQRYLQQIIEGDKRILLIDGVPIDHCLARIPQGDEFRGNMAAG CEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCC GRGESRPLNERDRWIAAQVGPEMRRRGMRFVGIDVIGDYLTEINVTSPTCLRELDAQCGL CCCCCCCCCHHHCEEEECCCHHHHHCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHCCC NIAGQLFDAIETGG CHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]