| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681439
Identifier: 182681439
GI number: 182681439
Start: 1054277
End: 1055086
Strand: Reverse
Name: 182681439
Synonym: XfasM23_0890
Alternate gene names: NA
Gene position: 1055086-1054277 (Counterclockwise)
Preceding gene: 182681440
Following gene: 182681435
Centisome position: 41.61
GC content: 34.07
Gene sequence:
>810_bases GTGGATTATGTAGATATATTGTCAGAAAAAACGATAACGATACTAATCTTTATATGTTTACTCGTTTTTTCTGCTATCTA TATCTCTTGGCGAGTAAACTCTTTCTACCCTATTCATATGCGCTTACTACGCTTATTTATCAGCAAGAGTGATATTGAGG ACGCAGTTATCAGCAAACACTTATCGAATCAAGCGGCTTTAATTACTTTTCGTATGGCTTTTGGTATTCAGTCTCATACC TTGCGTGATGCAAAAAAAGTAGCAAATTTCGCAGAAAGTAAAAATATATCATTGAATCTTATTGGGAAAGCGGGTGCAGC ATTTGATCTGAATACGTGCAGCATCAACAAGAAAAAAGTACCAAAGAGAATTTCATGTGTTTTATTATTCATACTCTCAA TGATTTTAATCTTTGCAGCACTCATGTCTGGAGTATTCGCAACAAGCAATCGTCTTTTGGGTCAACTAAATGAAACAGGC ACTTGGATTTTATTATCTGAGAATGAAGCGAAAATCGGATCTTCTTTTTTTAATTTACTTGGAAGAAATGAAACTATAAA TATACAAAATTGCAACGCTAAAGAGATCGTTACAGAAAAAAGACTCAATAACAGAGACCATCAAATCATTTGCGGCATAT GGAATAGTGCATCCATAAAAAAGTCACTCCAGAAAAGTATCAACGGGCAGCAGAAAGCCCTGATTATTTTGATGATAGTA CTCCTTTGGTTCTTTATAGACTTAATCAACACCACAAAAAATTGGTATTGTGCAATTCAACTAAATTCCATATTGGGCAG TAAATCATAA
Upstream 100 bases:
>100_bases CACCTCAATCCCCATAAAATAAAATTACGTTGAATCCAATAGTTTGAATCGCACAGGCATAGAGGCCAATGCTAATTTTT CATTAGAGAGGAGAATACTC
Downstream 100 bases:
>100_bases CCATCCGTTTTACAACTTAAATAGTTACCAAGCCAGGCCAGCCAAGCTTTCATTAAAGAGCGCCTAAGAAACGCCGCATC AACGGCCCCGCCTTCCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MDYVDILSEKTITILIFICLLVFSAIYISWRVNSFYPIHMRLLRLFISKSDIEDAVISKHLSNQAALITFRMAFGIQSHT LRDAKKVANFAESKNISLNLIGKAGAAFDLNTCSINKKKVPKRISCVLLFILSMILIFAALMSGVFATSNRLLGQLNETG TWILLSENEAKIGSSFFNLLGRNETINIQNCNAKEIVTEKRLNNRDHQIICGIWNSASIKKSLQKSINGQQKALIILMIV LLWFFIDLINTTKNWYCAIQLNSILGSKS
Sequences:
>Translated_269_residues MDYVDILSEKTITILIFICLLVFSAIYISWRVNSFYPIHMRLLRLFISKSDIEDAVISKHLSNQAALITFRMAFGIQSHT LRDAKKVANFAESKNISLNLIGKAGAAFDLNTCSINKKKVPKRISCVLLFILSMILIFAALMSGVFATSNRLLGQLNETG TWILLSENEAKIGSSFFNLLGRNETINIQNCNAKEIVTEKRLNNRDHQIICGIWNSASIKKSLQKSINGQQKALIILMIV LLWFFIDLINTTKNWYCAIQLNSILGSKS >Mature_269_residues MDYVDILSEKTITILIFICLLVFSAIYISWRVNSFYPIHMRLLRLFISKSDIEDAVISKHLSNQAALITFRMAFGIQSHT LRDAKKVANFAESKNISLNLIGKAGAAFDLNTCSINKKKVPKRISCVLLFILSMILIFAALMSGVFATSNRLLGQLNETG TWILLSENEAKIGSSFFNLLGRNETINIQNCNAKEIVTEKRLNNRDHQIICGIWNSASIKKSLQKSINGQQKALIILMIV LLWFFIDLINTTKNWYCAIQLNSILGSKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30311; Mature: 30311
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYVDILSEKTITILIFICLLVFSAIYISWRVNSFYPIHMRLLRLFISKSDIEDAVISKH CCHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCHHHHHHHHH LSNQAALITFRMAFGIQSHTLRDAKKVANFAESKNISLNLIGKAGAAFDLNTCSINKKKV HCCCHHHEEEHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCHHHC PKRISCVLLFILSMILIFAALMSGVFATSNRLLGQLNETGTWILLSENEAKIGSSFFNLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHH GRNETINIQNCNAKEIVTEKRLNNRDHQIICGIWNSASIKKSLQKSINGQQKALIILMIV CCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHH LLWFFIDLINTTKNWYCAIQLNSILGSKS HHHHHHHHHHCCCCEEEEEEEEHHCCCCC >Mature Secondary Structure MDYVDILSEKTITILIFICLLVFSAIYISWRVNSFYPIHMRLLRLFISKSDIEDAVISKH CCHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCHHHHHHHHH LSNQAALITFRMAFGIQSHTLRDAKKVANFAESKNISLNLIGKAGAAFDLNTCSINKKKV HCCCHHHEEEHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCHHHC PKRISCVLLFILSMILIFAALMSGVFATSNRLLGQLNETGTWILLSENEAKIGSSFFNLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHH GRNETINIQNCNAKEIVTEKRLNNRDHQIICGIWNSASIKKSLQKSINGQQKALIILMIV CCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHH LLWFFIDLINTTKNWYCAIQLNSILGSKS HHHHHHHHHHCCCCEEEEEEEEHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA