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The map label for this gene is ydjA [H]

Identifier: 182681401

GI number: 182681401

Start: 1002460

End: 1003035

Strand: Reverse

Name: ydjA [H]

Synonym: XfasM23_0850

Alternate gene names: 182681401

Gene position: 1003035-1002460 (Counterclockwise)

Preceding gene: 182681406

Following gene: 182681400

Centisome position: 39.56

GC content: 54.17

Gene sequence:

>576_bases
ATGAACACACTTTATCCCCTACACGCTTTGGATGCACGTCGCTCAGTACCCTCACGCCAGCTCAGCGAGCCAGGTCCAGA
TACGGCAACGCTGCGACGGATCCTACAATCAGCAGTACGTGTCCCCGATCACGGAAAGCTTGTGCCATTTCGGTTTCTAT
CTATTACTGGTCACGCACGTGAAGCGCTTGGTGAATTTTTGGTACAACGGACCCTGCAACGCGATCCAGATGCGCCGCAG
ACCATACTGGACAAAGAACGCGAGCGCTTTTGCCATGCGCCTGTAGTCATTACGGTAGTCGCACGGCTACAACCCACTCA
TCAAGTACCTAAACAAGAACAACTACTGACAACAGGCTGCGTTTGCTTTGCACTGCTGCAAGCCGCACAAGCCTACGGCT
TTGGTGCTCAATGGCTCACCGGCTGGATGGCCTATGACCGCACCGTCGCCGAGTATCTCCATCTTGGTCCACACGAGCAC
ATCATCGGCTTTATCCATATCGGCACACCACGCCTAGAAGTCCCTGAACGTGAGCGTCCGGATGTGGACGCATTACTCCA
TAACTGGACACCGTAA

Upstream 100 bases:

>100_bases
AGAAACGAAAAACTTGTTCATGTACTCCTGAACACATCCAAAGAGACGGAACAACAAGTCCGTCTATACTTGAGTAAATC
GACACTCAATAATCGAGACA

Downstream 100 bases:

>100_bases
GCGGAACCGCATCATTTTTGACAAACCATGCCACGCATAAATTTGCCTACTCAATCTGAGTACACGTACATATCCGCAAT
AGCATTACCATTCAGGGACA

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNTLYPLHALDARRSVPSRQLSEPGPDTATLRRILQSAVRVPDHGKLVPFRFLSITGHAREALGEFLVQRTLQRDPDAPQ
TILDKERERFCHAPVVITVVARLQPTHQVPKQEQLLTTGCVCFALLQAAQAYGFGAQWLTGWMAYDRTVAEYLHLGPHEH
IIGFIHIGTPRLEVPERERPDVDALLHNWTP

Sequences:

>Translated_191_residues
MNTLYPLHALDARRSVPSRQLSEPGPDTATLRRILQSAVRVPDHGKLVPFRFLSITGHAREALGEFLVQRTLQRDPDAPQ
TILDKERERFCHAPVVITVVARLQPTHQVPKQEQLLTTGCVCFALLQAAQAYGFGAQWLTGWMAYDRTVAEYLHLGPHEH
IIGFIHIGTPRLEVPERERPDVDALLHNWTP
>Mature_191_residues
MNTLYPLHALDARRSVPSRQLSEPGPDTATLRRILQSAVRVPDHGKLVPFRFLSITGHAREALGEFLVQRTLQRDPDAPQ
TILDKERERFCHAPVVITVVARLQPTHQVPKQEQLLTTGCVCFALLQAAQAYGFGAQWLTGWMAYDRTVAEYLHLGPHEH
IIGFIHIGTPRLEVPERERPDVDALLHNWTP

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=168, Percent_Identity=35.7142857142857, Blast_Score=110, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 21601; Mature: 21601

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLYPLHALDARRSVPSRQLSEPGPDTATLRRILQSAVRVPDHGKLVPFRFLSITGHAR
CCCCCCHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHEECCCHHH
EALGEFLVQRTLQRDPDAPQTILDKERERFCHAPVVITVVARLQPTHQVPKQEQLLTTGC
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHCCCHHHHHHHHHH
VCFALLQAAQAYGFGAQWLTGWMAYDRTVAEYLHLGPHEHIIGFIHIGTPRLEVPERERP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCCCC
DVDALLHNWTP
CHHHHHHCCCC
>Mature Secondary Structure
MNTLYPLHALDARRSVPSRQLSEPGPDTATLRRILQSAVRVPDHGKLVPFRFLSITGHAR
CCCCCCHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHEECCCHHH
EALGEFLVQRTLQRDPDAPQTILDKERERFCHAPVVITVVARLQPTHQVPKQEQLLTTGC
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHCCCHHHHHHHHHH
VCFALLQAAQAYGFGAQWLTGWMAYDRTVAEYLHLGPHEHIIGFIHIGTPRLEVPERERP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCCCC
DVDALLHNWTP
CHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]