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The map label for this gene is yxkH [H]

Identifier: 182681277

GI number: 182681277

Start: 852046

End: 852900

Strand: Reverse

Name: yxkH [H]

Synonym: XfasM23_0722

Alternate gene names: 182681277

Gene position: 852900-852046 (Counterclockwise)

Preceding gene: 182681278

Following gene: 182681269

Centisome position: 33.64

GC content: 56.84

Gene sequence:

>855_bases
ATGAGCCGTGCAACAGCCGTCCCTGTCCTCATGCACCATCACGTTTCACCATCAACGGGCATGATCACCGTCTCCCCGGA
ACACTTTGAAAGCCAGATTGCATGGCTGGCGAATGACGGCTGGACCTCACTCACCCTGGAGCAATACGCCGGCTTTCTCG
CCGGTCAACCCGTGCCGCACAAATCGATCGTGATTACCTTCGACGACGGCTATCTGGATAACTGGGTCTACGCACATCCG
ATCTTGCAGAAATACCACATGCATGCCGTCGTTTTCATTGTCACCAGCTGGATTAGCGATGGCCCAGCGCGTCCCCATGC
TGGACAATCCGGCGCGATATTGCCCACAACGCCAAACCACCATGCGTGCGAAACAGCCATCCTGCATGAGGGGCGCACCG
ACGAAGTGATGCTACGTTGGAGCGAAGTGCAAGCAATGATCGCCGCAGGCACCTTTGAGGCACATTGCCATACACACACC
CATACACGCTGGCTAACACTACAACTCAGCCGCGCCCAACGACGCGAAGGTCTCGACCGGGACCTCATCACCGCACGTAC
AGTACTGCAACAACGCCTAGGCAACGTCTCCAACACACTGTGCTGGCCATACGGCGACTTCGATGCAGACCATATCGAAA
TCGCACGCGCCCATGGCTTTCGCTATTTCCACACCACACATCCCTTTGGACGCAACGTCATTGGCGGCAACCCAGAACAC
ATCTACCGCTTCGCGCTCCGTAACCGCCCGGGGCACTGGCTGCGCAAACGCATCGCGCTCAGCTACCACCCACTCATTGC
ACCATTATTCAACCGCTTCAAAAGCCATAAAAAAGGCATGCAGCCGGGTCCATGA

Upstream 100 bases:

>100_bases
CCGGCTGGGATTGGATTCGCAAAAGCCCTGTGTTCAGCGCAACAGGGCACGCAAAGACCACCGAACAATACTATCTAAAG
TGGTTACAGGAGCTTGGCAA

Downstream 100 bases:

>100_bases
GATACAACACTCCCACCATGACCAAAGCTGCTTCAAGAAAAGAAATAAAACCTCGTGGCCTTGGCTGCAACAACGAAAGA
CATCCAATTCACGCCGCGTC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MSRATAVPVLMHHHVSPSTGMITVSPEHFESQIAWLANDGWTSLTLEQYAGFLAGQPVPHKSIVITFDDGYLDNWVYAHP
ILQKYHMHAVVFIVTSWISDGPARPHAGQSGAILPTTPNHHACETAILHEGRTDEVMLRWSEVQAMIAAGTFEAHCHTHT
HTRWLTLQLSRAQRREGLDRDLITARTVLQQRLGNVSNTLCWPYGDFDADHIEIARAHGFRYFHTTHPFGRNVIGGNPEH
IYRFALRNRPGHWLRKRIALSYHPLIAPLFNRFKSHKKGMQPGP

Sequences:

>Translated_284_residues
MSRATAVPVLMHHHVSPSTGMITVSPEHFESQIAWLANDGWTSLTLEQYAGFLAGQPVPHKSIVITFDDGYLDNWVYAHP
ILQKYHMHAVVFIVTSWISDGPARPHAGQSGAILPTTPNHHACETAILHEGRTDEVMLRWSEVQAMIAAGTFEAHCHTHT
HTRWLTLQLSRAQRREGLDRDLITARTVLQQRLGNVSNTLCWPYGDFDADHIEIARAHGFRYFHTTHPFGRNVIGGNPEH
IYRFALRNRPGHWLRKRIALSYHPLIAPLFNRFKSHKKGMQPGP
>Mature_283_residues
SRATAVPVLMHHHVSPSTGMITVSPEHFESQIAWLANDGWTSLTLEQYAGFLAGQPVPHKSIVITFDDGYLDNWVYAHPI
LQKYHMHAVVFIVTSWISDGPARPHAGQSGAILPTTPNHHACETAILHEGRTDEVMLRWSEVQAMIAAGTFEAHCHTHTH
TRWLTLQLSRAQRREGLDRDLITARTVLQQRLGNVSNTLCWPYGDFDADHIEIARAHGFRYFHTTHPFGRNVIGGNPEHI
YRFALRNRPGHWLRKRIALSYHPLIAPLFNRFKSHKKGMQPGP

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Escherichia coli, GI1786322, Length=225, Percent_Identity=26.2222222222222, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 32223; Mature: 32092

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRATAVPVLMHHHVSPSTGMITVSPEHFESQIAWLANDGWTSLTLEQYAGFLAGQPVPH
CCCCHHCHHHHCCCCCCCCCEEEECHHHHHHHEEEEECCCCCEEEHHHHHHHHCCCCCCC
KSIVITFDDGYLDNWVYAHPILQKYHMHAVVFIVTSWISDGPARPHAGQSGAILPTTPNH
CEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCC
HACETAILHEGRTDEVMLRWSEVQAMIAAGTFEAHCHTHTHTRWLTLQLSRAQRREGLDR
HHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCEEEEECCCCCEEEEEEEEHHHHHHCCCCH
DLITARTVLQQRLGNVSNTLCWPYGDFDADHIEIARAHGFRYFHTTHPFGRNVIGGNPEH
HHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEHHHCCEEEEECCCCCCCCCCCCCHHH
IYRFALRNRPGHWLRKRIALSYHPLIAPLFNRFKSHKKGMQPGP
HHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SRATAVPVLMHHHVSPSTGMITVSPEHFESQIAWLANDGWTSLTLEQYAGFLAGQPVPH
CCCHHCHHHHCCCCCCCCCEEEECHHHHHHHEEEEECCCCCEEEHHHHHHHHCCCCCCC
KSIVITFDDGYLDNWVYAHPILQKYHMHAVVFIVTSWISDGPARPHAGQSGAILPTTPNH
CEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCC
HACETAILHEGRTDEVMLRWSEVQAMIAAGTFEAHCHTHTHTRWLTLQLSRAQRREGLDR
HHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCEEEEECCCCCEEEEEEEEHHHHHHCCCCH
DLITARTVLQQRLGNVSNTLCWPYGDFDADHIEIARAHGFRYFHTTHPFGRNVIGGNPEH
HHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEHHHCCEEEEECCCCCCCCCCCCCHHH
IYRFALRNRPGHWLRKRIALSYHPLIAPLFNRFKSHKKGMQPGP
HHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]