| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is glmM
Identifier: 182681276
GI number: 182681276
Start: 850617
End: 851957
Strand: Direct
Name: glmM
Synonym: XfasM23_0721
Alternate gene names: 182681276
Gene position: 850617-851957 (Clockwise)
Preceding gene: 182681275
Following gene: 182681279
Centisome position: 33.55
GC content: 55.56
Gene sequence:
>1341_bases GTGTCCAGGTATTTTGGTACCGATGGCATCCGTGGCCGCGTTGGCCAGGGGTTGATTTCTGCTGATTTTGTATTGCGCCT GGGTAACGCGCTTGGCCGAGTGCTTGCTCAGGGCCGTGATACCCGTCCGATGGTGTTAATTGGTAAGGACACGCGTATCT CCGGTTATATGTTTGAGTCTGCTCTTGAGGCAGGTTTGGTGGCCGCTGGCGCTGATGTGCAGTTGATCGGCCCGATGCCA ACACCTGCGATTGCTTTCTTGACCAATACGTTGCGGGCTGATGCTGGTGTGGTGATCAGCGCATCCCACAATCCTCATGA TGACAATGGCATCAAGTTTTTTTCCGCGATGGGTGAAAAGCTCGACGATGCGACAGAAGCGGCGATTGAAGCGGCGATTG AGGCGCCATTCCTGACCGTTGACTCTGAATATTTGGGGAAGGTCAAGCGTACACGTGATGCAATTGGCCGCTATATCGAA TTCAGTAAGGCAAGTGTGCCGCGTGGTTTTACGCTGCGCGGGTTGAAGTTGGTATTGGATTGTGCGCATGGCGCCACGTA TCACATCGCACCGATGCTGTTTCGCGAATTAGGTGCGGAGTTAGTGACGATTGGTGTCGATCCGGATGGTTTGAATATCA ATGCCGGTGTTGGCTCTACTCACTTGGAGACTCTCGCTGCCACAGTGCGTGAGAGCGGTGCTGATTTGGGCATTGCCTTC GATGGTGACGGTGACAGGGTGCTGATGACGGATGCCCAAGGCCGGACTGTGGATGGAGACGACCTGTTGTATGTGCTGGC GCGTGCTTGGCGGGCTAGTGGTCGTTTAAAGGGCACAGTGGTTGGGACGTTGATGAGTAACTATGGTTTAGAGCAGGCGT TGGGGACCCTTGGGATCCCCTTTATACGTGCGAGGGTGGGTGACCGTTATGTGCATCAGGCATTGGTTGAGAGTGGAGGG GTGCTAGGCGGTGAGGCATCCGGTCACTTGTTATGTTTGGATCGCGCAACCACGGGTGATGGTATCGTCAGTGCATTACA GGTGTTGGAAGTGTTGCGTCATGAGGGGCTGACGTTGAGTCAGGCACTGTTGGGTTTACATAAGGTGCCGCAGAAGACGG TCAATGTGTGTTGGTCTGGTCCAGCCAGGGCTGCAGTCGAGATGCCGGAAGTACGTCAAGCATTGGTTGAAGCGCAAGCG GCGGTGCAGGGTCGGGGACGGGTGTTTTTGCGCCCTTCCGGCACCGAGCCGGTGGTGCGTATCACTGTCGAAGCCGATGA CGTTGTACTCATGCAGCAGACGCTTGATAGGCTTGCCGATGTGGTCCGTGACGCGGCGTGA
Upstream 100 bases:
>100_bases ATCGTCGTGAATTACGCGACCGTCTTGCGGATCTGATGGCGTTAATGATGCGTTATCCCAGGCCCGATAGCCCATCACAG GCGATGCGGGGGCAATGAGG
Downstream 100 bases:
>100_bases ATTGGATGTCTTTCGTTGTTGCAGCCAAGGCCACGAGGTTTTATTTCTTTTCTTGAAGCAGCTTTGGTCATGGTGGGAGT GTTGTATCTCATGGACCCGG
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MSRYFGTDGIRGRVGQGLISADFVLRLGNALGRVLAQGRDTRPMVLIGKDTRISGYMFESALEAGLVAAGADVQLIGPMP TPAIAFLTNTLRADAGVVISASHNPHDDNGIKFFSAMGEKLDDATEAAIEAAIEAPFLTVDSEYLGKVKRTRDAIGRYIE FSKASVPRGFTLRGLKLVLDCAHGATYHIAPMLFRELGAELVTIGVDPDGLNINAGVGSTHLETLAATVRESGADLGIAF DGDGDRVLMTDAQGRTVDGDDLLYVLARAWRASGRLKGTVVGTLMSNYGLEQALGTLGIPFIRARVGDRYVHQALVESGG VLGGEASGHLLCLDRATTGDGIVSALQVLEVLRHEGLTLSQALLGLHKVPQKTVNVCWSGPARAAVEMPEVRQALVEAQA AVQGRGRVFLRPSGTEPVVRITVEADDVVLMQQTLDRLADVVRDAA
Sequences:
>Translated_446_residues MSRYFGTDGIRGRVGQGLISADFVLRLGNALGRVLAQGRDTRPMVLIGKDTRISGYMFESALEAGLVAAGADVQLIGPMP TPAIAFLTNTLRADAGVVISASHNPHDDNGIKFFSAMGEKLDDATEAAIEAAIEAPFLTVDSEYLGKVKRTRDAIGRYIE FSKASVPRGFTLRGLKLVLDCAHGATYHIAPMLFRELGAELVTIGVDPDGLNINAGVGSTHLETLAATVRESGADLGIAF DGDGDRVLMTDAQGRTVDGDDLLYVLARAWRASGRLKGTVVGTLMSNYGLEQALGTLGIPFIRARVGDRYVHQALVESGG VLGGEASGHLLCLDRATTGDGIVSALQVLEVLRHEGLTLSQALLGLHKVPQKTVNVCWSGPARAAVEMPEVRQALVEAQA AVQGRGRVFLRPSGTEPVVRITVEADDVVLMQQTLDRLADVVRDAA >Mature_445_residues SRYFGTDGIRGRVGQGLISADFVLRLGNALGRVLAQGRDTRPMVLIGKDTRISGYMFESALEAGLVAAGADVQLIGPMPT PAIAFLTNTLRADAGVVISASHNPHDDNGIKFFSAMGEKLDDATEAAIEAAIEAPFLTVDSEYLGKVKRTRDAIGRYIEF SKASVPRGFTLRGLKLVLDCAHGATYHIAPMLFRELGAELVTIGVDPDGLNINAGVGSTHLETLAATVRESGADLGIAFD GDGDRVLMTDAQGRTVDGDDLLYVLARAWRASGRLKGTVVGTLMSNYGLEQALGTLGIPFIRARVGDRYVHQALVESGGV LGGEASGHLLCLDRATTGDGIVSALQVLEVLRHEGLTLSQALLGLHKVPQKTVNVCWSGPARAAVEMPEVRQALVEAQAA VQGRGRVFLRPSGTEPVVRITVEADDVVLMQQTLDRLADVVRDAA
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1789566, Length=441, Percent_Identity=55.328798185941, Blast_Score=452, Evalue=1e-128, Organism=Escherichia coli, GI1788361, Length=450, Percent_Identity=29.5555555555556, Blast_Score=128, Evalue=9e-31, Organism=Caenorhabditis elegans, GI71993870, Length=307, Percent_Identity=25.7328990228013, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71993878, Length=278, Percent_Identity=26.6187050359712, Blast_Score=68, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 47245; Mature: 47114
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYFGTDGIRGRVGQGLISADFVLRLGNALGRVLAQGRDTRPMVLIGKDTRISGYMFES CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHH ALEAGLVAAGADVQLIGPMPTPAIAFLTNTLRADAGVVISASHNPHDDNGIKFFSAMGEK HHHCCEEECCCCEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHH LDDATEAAIEAAIEAPFLTVDSEYLGKVKRTRDAIGRYIEFSKASVPRGFTLRGLKLVLD HHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEE CAHGATYHIAPMLFRELGAELVTIGVDPDGLNINAGVGSTHLETLAATVRESGADLGIAF CCCCCCCHHHHHHHHHCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEE DGDGDRVLMTDAQGRTVDGDDLLYVLARAWRASGRLKGTVVGTLMSNYGLEQALGTLGIP CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHCCCH FIRARVGDRYVHQALVESGGVLGGEASGHLLCLDRATTGDGIVSALQVLEVLRHEGLTLS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHH QALLGLHKVPQKTVNVCWSGPARAAVEMPEVRQALVEAQAAVQGRGRVFLRPSGTEPVVR HHHHHHHHCCHHHHHEEECCCCCHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEE ITVEADDVVLMQQTLDRLADVVRDAA EEECCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRYFGTDGIRGRVGQGLISADFVLRLGNALGRVLAQGRDTRPMVLIGKDTRISGYMFES CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHH ALEAGLVAAGADVQLIGPMPTPAIAFLTNTLRADAGVVISASHNPHDDNGIKFFSAMGEK HHHCCEEECCCCEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHH LDDATEAAIEAAIEAPFLTVDSEYLGKVKRTRDAIGRYIEFSKASVPRGFTLRGLKLVLD HHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEE CAHGATYHIAPMLFRELGAELVTIGVDPDGLNINAGVGSTHLETLAATVRESGADLGIAF CCCCCCCHHHHHHHHHCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEE DGDGDRVLMTDAQGRTVDGDDLLYVLARAWRASGRLKGTVVGTLMSNYGLEQALGTLGIP CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHCCCH FIRARVGDRYVHQALVESGGVLGGEASGHLLCLDRATTGDGIVSALQVLEVLRHEGLTLS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHH QALLGLHKVPQKTVNVCWSGPARAAVEMPEVRQALVEAQAAVQGRGRVFLRPSGTEPVVR HHHHHHHHCCHHHHHEEECCCCCHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEE ITVEADDVVLMQQTLDRLADVVRDAA EEECCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]