| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is gluP [H]
Identifier: 182681271
GI number: 182681271
Start: 844464
End: 845753
Strand: Direct
Name: gluP [H]
Synonym: XfasM23_0716
Alternate gene names: 182681271
Gene position: 844464-845753 (Clockwise)
Preceding gene: 182681270
Following gene: 182681272
Centisome position: 33.3
GC content: 51.01
Gene sequence:
>1290_bases ATGATTCCAGCCCGGTTTCCGAGTTCTACTGTTTCCATTGCTATTGTCGGTGTGTTGTTCTTCATTATCGGTTTTCTGAC CTGGGTCAATGGACCGCTGATTACCTTTGTGCATCTTGTCTTTGATCTGAATGAGGTCGATGCCTTCTTGGTGCTGATGG TGTTCTACCTGTCTTATTTCTTTCTCGCCTTGCCCTCGGCATGGATTCTCAAGTGCATTGGGTTGAAAAAAGGCTTGGCG TTGAGTTTGCTGTTGATGGCCGTAGGCGCAGTCGTCTTCGGTGAATTTTCGACACAACGGTATTACGCAGGCGCATTGGC CGGCTTGTTTGTGATTGGCAGTGGTTTAGCCTTGCAGCAAACTGCGGTCAATCCTTATATCAGCATCCTGGGGCCAATAG AGAGCGCGGCGCGACGTATTGCGGTGATGGGGATTTGTAACAAGGTCGCCGGTATTGTGGCGCCGTTGGTCATTGGTTCC CTGGTGCTGCATGGTGTTGGCGATTTGTCGATGCAAGTTGCAACTGCCGACCCGGCGACGAAGGAACAACTGCTTGCCGC CTTTGCCGCAAAGATTCATACACCATATCTCATCATGGCCGGTTTGTTGGCAGTGCTTGCGGTGGGCGTGTTGTTTTCTC CGCTGCCGGAGTTGCAGCCTGCTGACGTCAATCGTGTTTCATCCGGCGATACCACGCAAAAGACCAACATCTTTCAGTTC ACGCACTTGTGGCTTGGGGTGTTGTGCATGTTCGTTTATGTGGGTGTGGAGGTGATGGCTGGCGACGCAATAGGCACCTA TGGTCATGCACTCGGCTTGCCTTTGGACCAGACAAAACTGTTCACCTCAGCAACATTAGGAGCGATGTTGCTTGGTTACA TGACCGGTTTGGCGGTGATTCCAAACTTGATTTCTCAAGAACGTTATTTGAGTTTATCGGCGGTGTTGGGCGTCCTGTTT TCTATCGGTGCGGCACTGACGCATGGGTATGTATCGGTGGCTTTTGTTGCTGCATTGGGCTTTGCCAATGCGATGATGTG GCCAGCCATTTTCCCATTGGCAATCAATGCGTTGGGTCGTTTTACCGAGACAGGTTCAGCCTTGTTGATTATGGGGATCG CTGGTGGCGCGATCATCCCGCAGCTTTTCGCCTCTCTGAAACAGTACCTTGACTTCCAACTGGTGTTCGCTGGGTTGATG GTGCCTTGTTATCTGTACATTTTGTTTTATTCCTTGATTGCTGGAGCGATCAAGGGTCGCAGTGTGCAACGTTTAGCCCT CGGGAAATGA
Upstream 100 bases:
>100_bases CAGAGATTTAATTTCCGCAACGTTTTCGATGATGTTGTGGTCAAACTACGCTGTTGACTGTGGTTGACCTCCCCCCTTCC CCCCAAAAACTATTCTTCAC
Downstream 100 bases:
>100_bases CAAATGCGCCGACCGACCATCAAAGATATTGCAGAAAGAGCCGATGTCTCGTTGAAAACCGTTTCGAGGGTCATCAATAA CGAGTCCTCGGTGATGCCGG
Product: glucose/galactose transporter
Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MIPARFPSSTVSIAIVGVLFFIIGFLTWVNGPLITFVHLVFDLNEVDAFLVLMVFYLSYFFLALPSAWILKCIGLKKGLA LSLLLMAVGAVVFGEFSTQRYYAGALAGLFVIGSGLALQQTAVNPYISILGPIESAARRIAVMGICNKVAGIVAPLVIGS LVLHGVGDLSMQVATADPATKEQLLAAFAAKIHTPYLIMAGLLAVLAVGVLFSPLPELQPADVNRVSSGDTTQKTNIFQF THLWLGVLCMFVYVGVEVMAGDAIGTYGHALGLPLDQTKLFTSATLGAMLLGYMTGLAVIPNLISQERYLSLSAVLGVLF SIGAALTHGYVSVAFVAALGFANAMMWPAIFPLAINALGRFTETGSALLIMGIAGGAIIPQLFASLKQYLDFQLVFAGLM VPCYLYILFYSLIAGAIKGRSVQRLALGK
Sequences:
>Translated_429_residues MIPARFPSSTVSIAIVGVLFFIIGFLTWVNGPLITFVHLVFDLNEVDAFLVLMVFYLSYFFLALPSAWILKCIGLKKGLA LSLLLMAVGAVVFGEFSTQRYYAGALAGLFVIGSGLALQQTAVNPYISILGPIESAARRIAVMGICNKVAGIVAPLVIGS LVLHGVGDLSMQVATADPATKEQLLAAFAAKIHTPYLIMAGLLAVLAVGVLFSPLPELQPADVNRVSSGDTTQKTNIFQF THLWLGVLCMFVYVGVEVMAGDAIGTYGHALGLPLDQTKLFTSATLGAMLLGYMTGLAVIPNLISQERYLSLSAVLGVLF SIGAALTHGYVSVAFVAALGFANAMMWPAIFPLAINALGRFTETGSALLIMGIAGGAIIPQLFASLKQYLDFQLVFAGLM VPCYLYILFYSLIAGAIKGRSVQRLALGK >Mature_429_residues MIPARFPSSTVSIAIVGVLFFIIGFLTWVNGPLITFVHLVFDLNEVDAFLVLMVFYLSYFFLALPSAWILKCIGLKKGLA LSLLLMAVGAVVFGEFSTQRYYAGALAGLFVIGSGLALQQTAVNPYISILGPIESAARRIAVMGICNKVAGIVAPLVIGS LVLHGVGDLSMQVATADPATKEQLLAAFAAKIHTPYLIMAGLLAVLAVGVLFSPLPELQPADVNRVSSGDTTQKTNIFQF THLWLGVLCMFVYVGVEVMAGDAIGTYGHALGLPLDQTKLFTSATLGAMLLGYMTGLAVIPNLISQERYLSLSAVLGVLF SIGAALTHGYVSVAFVAALGFANAMMWPAIFPLAINALGRFTETGSALLIMGIAGGAIIPQLFASLKQYLDFQLVFAGLM VPCYLYILFYSLIAGAIKGRSVQRLALGK
Specific function: Intake of glucose and galactose (Potential) [H]
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]
Homologues:
Organism=Escherichia coli, GI1789166, Length=381, Percent_Identity=27.0341207349081, Blast_Score=123, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005964 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45459; Mature: 45459
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPARFPSSTVSIAIVGVLFFIIGFLTWVNGPLITFVHLVFDLNEVDAFLVLMVFYLSYF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLALPSAWILKCIGLKKGLALSLLLMAVGAVVFGEFSTQRYYAGALAGLFVIGSGLALQQ HHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHH TAVNPYISILGPIESAARRIAVMGICNKVAGIVAPLVIGSLVLHGVGDLSMQVATADPAT HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCH KEQLLAAFAAKIHTPYLIMAGLLAVLAVGVLFSPLPELQPADVNRVSSGDTTQKTNIFQF HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH THLWLGVLCMFVYVGVEVMAGDAIGTYGHALGLPLDQTKLFTSATLGAMLLGYMTGLAVI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH PNLISQERYLSLSAVLGVLFSIGAALTHGYVSVAFVAALGFANAMMWPAIFPLAINALGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTETGSALLIMGIAGGAIIPQLFASLKQYLDFQLVFAGLMVPCYLYILFYSLIAGAIKGR HCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SVQRLALGK CHHHHHCCC >Mature Secondary Structure MIPARFPSSTVSIAIVGVLFFIIGFLTWVNGPLITFVHLVFDLNEVDAFLVLMVFYLSYF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLALPSAWILKCIGLKKGLALSLLLMAVGAVVFGEFSTQRYYAGALAGLFVIGSGLALQQ HHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHH TAVNPYISILGPIESAARRIAVMGICNKVAGIVAPLVIGSLVLHGVGDLSMQVATADPAT HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCH KEQLLAAFAAKIHTPYLIMAGLLAVLAVGVLFSPLPELQPADVNRVSSGDTTQKTNIFQF HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH THLWLGVLCMFVYVGVEVMAGDAIGTYGHALGLPLDQTKLFTSATLGAMLLGYMTGLAVI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH PNLISQERYLSLSAVLGVLFSIGAALTHGYVSVAFVAALGFANAMMWPAIFPLAINALGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTETGSALLIMGIAGGAIIPQLFASLKQYLDFQLVFAGLMVPCYLYILFYSLIAGAIKGR HCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SVQRLALGK CHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]
General reaction: Permease [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9168605 [H]