Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681234
Identifier: 182681234
GI number: 182681234
Start: 801775
End: 802350
Strand: Reverse
Name: 182681234
Synonym: XfasM23_0679
Alternate gene names: NA
Gene position: 802350-801775 (Counterclockwise)
Preceding gene: 182681237
Following gene: 182681230
Centisome position: 31.64
GC content: 47.92
Gene sequence:
>576_bases GTGACATCAGTCTCGTTCGATACACTCAAATTTGCAAATAAGCTTAAAACTGCCGCCATTCCACCTGCACACGCTGAGGC CGAAGCAGAAGCGTTAGAAGAGGTGCTGAAAACAAATCTACAAGAATCCAGAAACGGTAAGGCGTTAGCGCGTCTTGAAG CAAATATGGAGAAAGGATTCGCAGAGGTAGATCTACGTTTCGCACAGATAAATCAACGCTTCTCTGAAGTAAAAGGAATC GACGACGGCGACGCGGCGCTACACCATGCGGCGAAAGTGCTTGTGCTCACATCATTGATGCAATTTGCACTGCTCACGGG GGACTTTGAGTTCCACCTACAGGATGCCGCTAGCCTACAGGCTGCTGCACCATTGCCTGATAGCACGCGCTCCTCTTCAT GCAGCATCTTATTTTTTCCGAATGCAGGGTGGCATACGAGGCTGGAACAGGGCCTTTCCCAACACCTTAGCAAGCCCCCC AAAACCATCTTCAGTATGCACCTCATCAACCAAAATATAATTCAATCACTTAGATTGACATTGATAACAGCACCTTCGGA AACCGATTCCATATAA
Upstream 100 bases:
>100_bases CGGCGGAGCTTCATATCAGATACTCACATCACCTTGTCATCTACAGTAAGGCAGCACTGCTACACACTCGCGATCACATA TCGATAAGACAGGATAATTC
Downstream 100 bases:
>100_bases ATATTTGATTTAATTATTTTTTTCCAGAAAAGTACGGCACTCTACCCGGATCTGTTCCCCACTGCGGCGCCAATAATAGG TCACACAATGACGCTGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MTSVSFDTLKFANKLKTAAIPPAHAEAEAEALEEVLKTNLQESRNGKALARLEANMEKGFAEVDLRFAQINQRFSEVKGI DDGDAALHHAAKVLVLTSLMQFALLTGDFEFHLQDAASLQAAAPLPDSTRSSSCSILFFPNAGWHTRLEQGLSQHLSKPP KTIFSMHLINQNIIQSLRLTLITAPSETDSI
Sequences:
>Translated_191_residues MTSVSFDTLKFANKLKTAAIPPAHAEAEAEALEEVLKTNLQESRNGKALARLEANMEKGFAEVDLRFAQINQRFSEVKGI DDGDAALHHAAKVLVLTSLMQFALLTGDFEFHLQDAASLQAAAPLPDSTRSSSCSILFFPNAGWHTRLEQGLSQHLSKPP KTIFSMHLINQNIIQSLRLTLITAPSETDSI >Mature_190_residues TSVSFDTLKFANKLKTAAIPPAHAEAEAEALEEVLKTNLQESRNGKALARLEANMEKGFAEVDLRFAQINQRFSEVKGID DGDAALHHAAKVLVLTSLMQFALLTGDFEFHLQDAASLQAAAPLPDSTRSSSCSILFFPNAGWHTRLEQGLSQHLSKPPK TIFSMHLINQNIIQSLRLTLITAPSETDSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20897; Mature: 20766
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVSFDTLKFANKLKTAAIPPAHAEAEAEALEEVLKTNLQESRNGKALARLEANMEKGF CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCH AEVDLRFAQINQRFSEVKGIDDGDAALHHAAKVLVLTSLMQFALLTGDFEFHLQDAASLQ HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHH AAAPLPDSTRSSSCSILFFPNAGWHTRLEQGLSQHLSKPPKTIFSMHLINQNIIQSLRLT HCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LITAPSETDSI HEECCCCCCCC >Mature Secondary Structure TSVSFDTLKFANKLKTAAIPPAHAEAEAEALEEVLKTNLQESRNGKALARLEANMEKGF CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCH AEVDLRFAQINQRFSEVKGIDDGDAALHHAAKVLVLTSLMQFALLTGDFEFHLQDAASLQ HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHH AAAPLPDSTRSSSCSILFFPNAGWHTRLEQGLSQHLSKPPKTIFSMHLINQNIIQSLRLT HCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LITAPSETDSI HEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA