| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is asd [H]
Identifier: 182681196
GI number: 182681196
Start: 755737
End: 756771
Strand: Direct
Name: asd [H]
Synonym: XfasM23_0640
Alternate gene names: 182681196
Gene position: 755737-756771 (Clockwise)
Preceding gene: 182681195
Following gene: 182681197
Centisome position: 29.8
GC content: 51.5
Gene sequence:
>1035_bases ATGTCTTCATCCAAATCAGATCGTTGTTTTAACATTGCCATTGTTGGCGCTACTGGCGCAGTGGGCGAGGCCATGCTTTC GATCTTGGAAGAGCGCCATTTCCCAGTTGCGAAGTTGATTCCTCTTGCTTCAGCGCGCTCGGCGGGTTCTCAGATCACCT TCAAGGGCGAGAGCATCAACGTATTGGAGCTGGAGCACTTTGATCCGCATGGTGTAGATATTGCATTGTTTTCTGCTGGC AGCAGAGTCTCTGAAGCGTATGCGCCACAGTTTGCGGCTGCTGGTGTGGTGGTCATCGATAATTCTTCCGCGTTTCGTTA CGAGGAGGATGTGCCGTTAGTCGTATCGGAGGTGAACCCTCATGCGTTGAAGCAGCGGCCGCGTGGCATCATTGCTAACC CGAATTGTTCGACCATGCAGCTCATGCCGGTGCTGGCGCCAATCCACAGGGAATATCGCATTGAGCGTATCAATGTTGCC ACCTATCAATCCGTGTCTGGCGGTGGCCGCTCGGCGCTTGAAGAATTGGGACAGCAGACTGCACAGTTGTTAGCCTTTCA AGAGATCAACCCAAAGCGATTTCCTGTACAAATTGCTTTCAACTTGATTCCGCATATCGACGATTTTCAGTCTAACGGCT ATACCAAAGAGGAGATGAAATTGGTTTGGGAGACAAAGAAGATTCTTGAGGACAGCAGCATTCAGGTGAATCCAACGGCG GTGCGTGTACCAGTGTTTTTTGGTCATTCCGAAGCGGTCAATATCGAAACGCAAAAGAAAGTCACTTCTGAGCAGGTACG TGCGTTGCTAGCCAGTGCACCAGGTGTTGAGGTCGTTGATGAGTGGCAGCCTGGCGGTTATCCGACTCCTGTGACCCACG CTTCCGGCAAAGATCCTGTGTTTGTTGGTCGGATTCGTGATGATTTATCCCATCCACGCGGCCTGAACCTGTGGGTAGTT GCCGACAACATCCGTAAGGGGGCTGCGCTTAATGCAATACAGCTTGCTGAACTAGTGACGGGCGAGACGATTTGA
Upstream 100 bases:
>100_bases GATAAGGGGTTTCGGTATGTTTTTATAGATTTTCAAAATTCATAGATCGCCGTGTTGCTGTTTCTTTTGTTTTACCCTTA TTTTAAAAGGAACAATGTTT
Downstream 100 bases:
>100_bases GCATACTAGGATTTCCCCGTAGTGGAACGGTATACAGGTGGCGGCGATGGGGTGGTTATTACCCTTTGCCGTTTGCGCGA GTAGCAATACTGATCGTATT
Product: aspartate-semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase; ASADH [H]
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSSSKSDRCFNIAIVGATGAVGEAMLSILEERHFPVAKLIPLASARSAGSQITFKGESINVLELEHFDPHGVDIALFSAG SRVSEAYAPQFAAAGVVVIDNSSAFRYEEDVPLVVSEVNPHALKQRPRGIIANPNCSTMQLMPVLAPIHREYRIERINVA TYQSVSGGGRSALEELGQQTAQLLAFQEINPKRFPVQIAFNLIPHIDDFQSNGYTKEEMKLVWETKKILEDSSIQVNPTA VRVPVFFGHSEAVNIETQKKVTSEQVRALLASAPGVEVVDEWQPGGYPTPVTHASGKDPVFVGRIRDDLSHPRGLNLWVV ADNIRKGAALNAIQLAELVTGETI
Sequences:
>Translated_344_residues MSSSKSDRCFNIAIVGATGAVGEAMLSILEERHFPVAKLIPLASARSAGSQITFKGESINVLELEHFDPHGVDIALFSAG SRVSEAYAPQFAAAGVVVIDNSSAFRYEEDVPLVVSEVNPHALKQRPRGIIANPNCSTMQLMPVLAPIHREYRIERINVA TYQSVSGGGRSALEELGQQTAQLLAFQEINPKRFPVQIAFNLIPHIDDFQSNGYTKEEMKLVWETKKILEDSSIQVNPTA VRVPVFFGHSEAVNIETQKKVTSEQVRALLASAPGVEVVDEWQPGGYPTPVTHASGKDPVFVGRIRDDLSHPRGLNLWVV ADNIRKGAALNAIQLAELVTGETI >Mature_343_residues SSSKSDRCFNIAIVGATGAVGEAMLSILEERHFPVAKLIPLASARSAGSQITFKGESINVLELEHFDPHGVDIALFSAGS RVSEAYAPQFAAAGVVVIDNSSAFRYEEDVPLVVSEVNPHALKQRPRGIIANPNCSTMQLMPVLAPIHREYRIERINVAT YQSVSGGGRSALEELGQQTAQLLAFQEINPKRFPVQIAFNLIPHIDDFQSNGYTKEEMKLVWETKKILEDSSIQVNPTAV RVPVFFGHSEAVNIETQKKVTSEQVRALLASAPGVEVVDEWQPGGYPTPVTHASGKDPVFVGRIRDDLSHPRGLNLWVVA DNIRKGAALNAIQLAELVTGETI
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=337, Percent_Identity=38.5756676557863, Blast_Score=228, Evalue=4e-61, Organism=Escherichia coli, GI1789841, Length=358, Percent_Identity=27.6536312849162, Blast_Score=93, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6320362, Length=392, Percent_Identity=27.2959183673469, Blast_Score=90, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012080 - InterPro: IPR005986 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.11 [H]
Molecular weight: Translated: 37440; Mature: 37309
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSKSDRCFNIAIVGATGAVGEAMLSILEERHFPVAKLIPLASARSAGSQITFKGESIN CCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCEE VLELEHFDPHGVDIALFSAGSRVSEAYAPQFAAAGVVVIDNSSAFRYEEDVPLVVSEVNP EEEEECCCCCCCEEEEEECCCHHHHHHCCHHHHCCEEEEECCCCEEECCCCCEEEECCCH HALKQRPRGIIANPNCSTMQLMPVLAPIHREYRIERINVATYQSVSGGGRSALEELGQQT HHHHHCCCCEEECCCCCCEEHHHHHHHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHHHH AQLLAFQEINPKRFPVQIAFNLIPHIDDFQSNGYTKEEMKLVWETKKILEDSSIQVNPTA HHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCE VRVPVFFGHSEAVNIETQKKVTSEQVRALLASAPGVEVVDEWQPGGYPTPVTHASGKDPV EEEEEEECCCCEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCE FVGRIRDDLSHPRGLNLWVVADNIRKGAALNAIQLAELVTGETI EEEEHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure SSSKSDRCFNIAIVGATGAVGEAMLSILEERHFPVAKLIPLASARSAGSQITFKGESIN CCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCEE VLELEHFDPHGVDIALFSAGSRVSEAYAPQFAAAGVVVIDNSSAFRYEEDVPLVVSEVNP EEEEECCCCCCCEEEEEECCCHHHHHHCCHHHHCCEEEEECCCCEEECCCCCEEEECCCH HALKQRPRGIIANPNCSTMQLMPVLAPIHREYRIERINVATYQSVSGGGRSALEELGQQT HHHHHCCCCEEECCCCCCEEHHHHHHHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHHHH AQLLAFQEINPKRFPVQIAFNLIPHIDDFQSNGYTKEEMKLVWETKKILEDSSIQVNPTA HHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCE VRVPVFFGHSEAVNIETQKKVTSEQVRALLASAPGVEVVDEWQPGGYPTPVTHASGKDPV EEEEEEECCCCEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCE FVGRIRDDLSHPRGLNLWVVADNIRKGAALNAIQLAELVTGETI EEEEHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9573067 [H]