| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is cysU [H]
Identifier: 182681177
GI number: 182681177
Start: 730099
End: 730959
Strand: Direct
Name: cysU [H]
Synonym: XfasM23_0619
Alternate gene names: 182681177
Gene position: 730099-730959 (Clockwise)
Preceding gene: 182681176
Following gene: 182681178
Centisome position: 28.79
GC content: 54.59
Gene sequence:
>861_bases ATGGCTGAAAGTACTGTGGCGCCGGCGCGTTTGTCACGTCGGCGCGTGATTCCTGGCCTTGGTTTGAGTCTTGGAATCAC CTTTGTTTGGTTGGGGCTGATCGTGCTGATTCCGCTGGTTGGCGTATTTGTCAAGGCCAGTGGGTTGGGATGGAGTGGGC TATGGAAGGTATGGACGGAACCACGGGTGCTGTCTGCGTTGTCGGTCAGTTTTGGCGCTGCGTTAGTTGCGGCGGCGTTT AACGCGGTGATGGGGACGTGGGTAGCTTGGGTGTTTGGGCGTTACGATTTTCCTGGTAAGCGTGTTTTCGATGCGATCAT TGATTTACCGTTCGCATTGCCGACAGCAGTGGCCGGTATTGCGCTGGCGGCATTGTATGGACCCAATGGATGGATAGGGC GTTGGCTGGAGCTGGCTGGGTTCAAGGTTGCTTACACTCCGTTGGGGATCGTAGTAGCGCTGGTGTTCGTTGGTCTGCCT TTTGTGGTGCGGATTGTCCAGCCGGTGTTGGCAGAGGCCGAGAAGGAGTTGGAGGAGGCTGCTGCTTCACTCGGTGCGAA TCGTTGGCAGACGATGTTCCGTGTCGTATTGCCGACGCTATGGCCTGCAATGTTGACGGGATTTGCGTTGGCTTTCGCGC GCGGTGTGGGTGAGTATGGGTCGGTGATTTTTATTGCTGGCAATCTACCCAATGCAACTGAGATCGCGCCGTTGCTCATC ACGATTCGTTTGGAGGAGTTTGACTATTCTGGAGCTACTGCAATTGCGGCAGTAATGTTGTTGTTGTCATTCACGGTGTT GTTAATGGTCAACGCGATGCAGGCATGCTTATTGCGTGTTAAACATCGGGGGGGAAGATGA
Upstream 100 bases:
>100_bases GGTGACGATCGGGCGAGCGTTCGGTTCTTGGGCTAAGGTGCAGCAGGAGCATTTTACCGATGGTGGTGTGTTCGACCAGA TCCAGGCGGGAAAGTAGTCC
Downstream 100 bases:
>100_bases GCAAGGATATGATGTCTGGGCCTTCTCTCTGTGTTCAGGGGCAGAGGGGTGTACAGCGTTGGCATCGGTTGTTGACCGCA TCTGCGACGACCGAGTCGTT
Product: sulfate ABC transporter inner membrane protein CysT
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MAESTVAPARLSRRRVIPGLGLSLGITFVWLGLIVLIPLVGVFVKASGLGWSGLWKVWTEPRVLSALSVSFGAALVAAAF NAVMGTWVAWVFGRYDFPGKRVFDAIIDLPFALPTAVAGIALAALYGPNGWIGRWLELAGFKVAYTPLGIVVALVFVGLP FVVRIVQPVLAEAEKELEEAAASLGANRWQTMFRVVLPTLWPAMLTGFALAFARGVGEYGSVIFIAGNLPNATEIAPLLI TIRLEEFDYSGATAIAAVMLLLSFTVLLMVNAMQACLLRVKHRGGR
Sequences:
>Translated_286_residues MAESTVAPARLSRRRVIPGLGLSLGITFVWLGLIVLIPLVGVFVKASGLGWSGLWKVWTEPRVLSALSVSFGAALVAAAF NAVMGTWVAWVFGRYDFPGKRVFDAIIDLPFALPTAVAGIALAALYGPNGWIGRWLELAGFKVAYTPLGIVVALVFVGLP FVVRIVQPVLAEAEKELEEAAASLGANRWQTMFRVVLPTLWPAMLTGFALAFARGVGEYGSVIFIAGNLPNATEIAPLLI TIRLEEFDYSGATAIAAVMLLLSFTVLLMVNAMQACLLRVKHRGGR >Mature_285_residues AESTVAPARLSRRRVIPGLGLSLGITFVWLGLIVLIPLVGVFVKASGLGWSGLWKVWTEPRVLSALSVSFGAALVAAAFN AVMGTWVAWVFGRYDFPGKRVFDAIIDLPFALPTAVAGIALAALYGPNGWIGRWLELAGFKVAYTPLGIVVALVFVGLPF VVRIVQPVLAEAEKELEEAAASLGANRWQTMFRVVLPTLWPAMLTGFALAFARGVGEYGSVIFIAGNLPNATEIAPLLIT IRLEEFDYSGATAIAAVMLLLSFTVLLMVNAMQACLLRVKHRGGR
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=265, Percent_Identity=50.188679245283, Blast_Score=244, Evalue=5e-66, Organism=Escherichia coli, GI87082099, Length=286, Percent_Identity=31.8181818181818, Blast_Score=147, Evalue=6e-37, Organism=Escherichia coli, GI1786980, Length=232, Percent_Identity=31.0344827586207, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786254, Length=215, Percent_Identity=26.5116279069767, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1787369, Length=165, Percent_Identity=24.2424242424242, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30640; Mature: 30509
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESTVAPARLSRRRVIPGLGLSLGITFVWLGLIVLIPLVGVFVKASGLGWSGLWKVWTE CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC PRVLSALSVSFGAALVAAAFNAVMGTWVAWVFGRYDFPGKRVFDAIIDLPFALPTAVAGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHH ALAALYGPNGWIGRWLELAGFKVAYTPLGIVVALVFVGLPFVVRIVQPVLAEAEKELEEA HHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AASLGANRWQTMFRVVLPTLWPAMLTGFALAFARGVGEYGSVIFIAGNLPNATEIAPLLI HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHE TIRLEEFDYSGATAIAAVMLLLSFTVLLMVNAMQACLLRVKHRGGR EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AESTVAPARLSRRRVIPGLGLSLGITFVWLGLIVLIPLVGVFVKASGLGWSGLWKVWTE CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC PRVLSALSVSFGAALVAAAFNAVMGTWVAWVFGRYDFPGKRVFDAIIDLPFALPTAVAGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHH ALAALYGPNGWIGRWLELAGFKVAYTPLGIVVALVFVGLPFVVRIVQPVLAEAEKELEEA HHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AASLGANRWQTMFRVVLPTLWPAMLTGFALAFARGVGEYGSVIFIAGNLPNATEIAPLLI HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHE TIRLEEFDYSGATAIAAVMLLLSFTVLLMVNAMQACLLRVKHRGGR EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]