Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is minC
Identifier: 182681156
GI number: 182681156
Start: 707923
End: 708639
Strand: Reverse
Name: minC
Synonym: XfasM23_0598
Alternate gene names: 182681156
Gene position: 708639-707923 (Counterclockwise)
Preceding gene: 182681157
Following gene: 182681155
Centisome position: 27.95
GC content: 53.97
Gene sequence:
>717_bases ATGTCGAATGTGAACATGGACTTCGAGCAAGCCGGCGAACTGAAAATAGGCCAAGTGGGTATCGCCACTTTGCGCATCCG TACTCTGAACGTACCACGCCTGATTCAAGAAATGTCTGACCGAGTCACGCGCGCGCCCAAGCTCTTCAGACGCACTGCCG TGATCCTAGACTTCGGCGAACTCCCGCACCCTCCGGACCTGGCCACTGCAAAAGCACTGGTGGAAGGCTTGCGCGCAGCC AACGTGCTGCCCGTGGCCATTGCCTATGGGACCAATGAAATTGACCTACTATCGCAACAACTTGGACTACCTCTACTGTC CAAGTTCCGTGCTCATTACGAACGCCAAGAAGTAGCCGCTCCACCACCCCAATCAACGCCACCTATAAGCACTGGCCGAA TACAACACACTACCGTGCGGTCCGGTCAACAACTGTATGCAGAGCACTGCGATTTAACCATCCTGAATACAGTCGGCGCA GGTGCCGAAGTCATCGCCGACGGTAACATCCACATTTATGGGACGCTGCGCGGTCGTGCAATGGCGGGTGCTCGGGGTAA TGCCGAAATGCGAATATTTTGCCGCGACTTTCAAGCAGAACTGATCGCAATTGCAGGCCGATACAAGGTGCTAGACGACA TCCCCACTGAACTACGTGGTAAAGCTGTCCAAGTCTGGCTGGAACAAAATCAGATCAAAATTGCTGCGTTGGATTGA
Upstream 100 bases:
>100_bases CCCCTGGATCCAAGAAACCTACGGTGACAAACTTCCGAACCTCCCCTGGGTAGGCCTGCAACGCCATATCTGCACACCCA ACTAGGCGGAGAAGCAAATC
Downstream 100 bases:
>100_bases CGCAGCCTCACCACAGAACGTATCAGGAGAAGTCCTTTGGCTGAAATTATCGTAATCACTTCCGGCAAGGGCGGCGTTGG CAAAACGACTACCAGCGCAA
Product: septum formation inhibitor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSNVNMDFEQAGELKIGQVGIATLRIRTLNVPRLIQEMSDRVTRAPKLFRRTAVILDFGELPHPPDLATAKALVEGLRAA NVLPVAIAYGTNEIDLLSQQLGLPLLSKFRAHYERQEVAAPPPQSTPPISTGRIQHTTVRSGQQLYAEHCDLTILNTVGA GAEVIADGNIHIYGTLRGRAMAGARGNAEMRIFCRDFQAELIAIAGRYKVLDDIPTELRGKAVQVWLEQNQIKIAALD
Sequences:
>Translated_238_residues MSNVNMDFEQAGELKIGQVGIATLRIRTLNVPRLIQEMSDRVTRAPKLFRRTAVILDFGELPHPPDLATAKALVEGLRAA NVLPVAIAYGTNEIDLLSQQLGLPLLSKFRAHYERQEVAAPPPQSTPPISTGRIQHTTVRSGQQLYAEHCDLTILNTVGA GAEVIADGNIHIYGTLRGRAMAGARGNAEMRIFCRDFQAELIAIAGRYKVLDDIPTELRGKAVQVWLEQNQIKIAALD >Mature_237_residues SNVNMDFEQAGELKIGQVGIATLRIRTLNVPRLIQEMSDRVTRAPKLFRRTAVILDFGELPHPPDLATAKALVEGLRAAN VLPVAIAYGTNEIDLLSQQLGLPLLSKFRAHYERQEVAAPPPQSTPPISTGRIQHTTVRSGQQLYAEHCDLTILNTVGAG AEVIADGNIHIYGTLRGRAMAGARGNAEMRIFCRDFQAELIAIAGRYKVLDDIPTELRGKAVQVWLEQNQIKIAALD
Specific function: Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize ftsZ filaments that have formed before they mature into polar Z rings. Prevents ftsZ polymerization
COG id: COG0850
COG function: function code D; Septum formation inhibitor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the minC family
Homologues:
Organism=Escherichia coli, GI1787424, Length=214, Percent_Identity=39.2523364485981, Blast_Score=149, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MINC_XYLF2 (B2I967)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001829316.1 - ProteinModelPortal: B2I967 - GeneID: 6202872 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_0598 - HOGENOM: HBG399077 - OMA: ARIFCRD - ProtClustDB: PRK04596 - HAMAP: MF_00267 - InterPro: IPR016098 - InterPro: IPR013033 - InterPro: IPR007874 - InterPro: IPR005526 - Gene3D: G3DSA:2.160.20.70 - TIGRFAMs: TIGR01222
Pfam domain/function: PF03775 MinC_C; PF05209 MinC_N; SSF63848 MinC_C
EC number: NA
Molecular weight: Translated: 26095; Mature: 25963
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVNMDFEQAGELKIGQVGIATLRIRTLNVPRLIQEMSDRVTRAPKLFRRTAVILDFGE CCCCCCCHHHCCCEEECCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHEEEEECCC LPHPPDLATAKALVEGLRAANVLPVAIAYGTNEIDLLSQQLGLPLLSKFRAHYERQEVAA CCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHCCC PPPQSTPPISTGRIQHTTVRSGQQLYAEHCDLTILNTVGAGAEVIADGNIHIYGTLRGRA CCCCCCCCCCCCCEEEHHHHCCHHHHHHHCCEEEEECCCCCCEEEECCCEEEEEEECCCE MAGARGNAEMRIFCRDFQAELIAIAGRYKVLDDIPTELRGKAVQVWLEQNQIKIAALD EECCCCCCEEEEEEEHHHHHHHHHHCCHHHHHCCCHHHCCCEEEEEEECCEEEEEEEC >Mature Secondary Structure SNVNMDFEQAGELKIGQVGIATLRIRTLNVPRLIQEMSDRVTRAPKLFRRTAVILDFGE CCCCCCHHHCCCEEECCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHEEEEECCC LPHPPDLATAKALVEGLRAANVLPVAIAYGTNEIDLLSQQLGLPLLSKFRAHYERQEVAA CCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHCCC PPPQSTPPISTGRIQHTTVRSGQQLYAEHCDLTILNTVGAGAEVIADGNIHIYGTLRGRA CCCCCCCCCCCCCEEEHHHHCCHHHHHHHCCEEEEECCCCCCEEEECCCEEEEEEECCCE MAGARGNAEMRIFCRDFQAELIAIAGRYKVLDDIPTELRGKAVQVWLEQNQIKIAALD EECCCCCCEEEEEEEHHHHHHHHHHCCHHHHHCCCHHHCCCEEEEEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA