Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is ppsA [H]
Identifier: 182681106
GI number: 182681106
Start: 649935
End: 652334
Strand: Reverse
Name: ppsA [H]
Synonym: XfasM23_0548
Alternate gene names: 182681106
Gene position: 652334-649935 (Counterclockwise)
Preceding gene: 182681110
Following gene: 182681105
Centisome position: 25.73
GC content: 53.67
Gene sequence:
>2400_bases ATGGCCCTAAACGGAGCATCGTACTTGAACGAAAATATCCTTTGGTTACATGAACTGCGCTTGACCGATCTGGCCCGCGT CGGTGGTAAAAATTCCTCACTCGGCGAAATGATCGGCAATCTCACTGCCCTTGGAGTCTCTGTTCCAGGTGGCTATGCCA CCACCGCAGCAGCATTTAAAGCCTTTATCGCTTACAACAACCTGTCCAAACGGATCTACGACAAACTAGCCACCCTTGAT GTTGAGGACGTCAAAGCACTGACAGCTGCCGGCAAAGAAATCCGCGACTGGGTCATTGACGCTCCATTACAACCAGAACT GGAGAAGGATATTCGTGACGCCTACGACACGTTGTCAAAAGACAATAGCGGCAACGACGTCGCCGTAGCGGTGCGCTCTT CAGCGACCGCGGAAGATTTACCAGACGCCTCATTCGCCGGCCAACAGGAAACCTTTCTTAATGTGATCGGCGCCGACCAG GTCGTACACAAAATTAAAGAAGTATTCGCAAGTCTTTATAACGATCGTGCAATTGCCTACCGCGTCCATCATGGCTTCAA GCACGAGGACGTATTCCTCTCCGCCGGAATACAACTGATGGTTCGCTCGGATATCAGTGCCTCCGGCGTGCTGTTCACTC TAGACACCGAGTCAGGCTTCCGCGAGGTGGTGTTCGTCACCGCCAGCTTCGGCCTTGGTGAAATGGTCGTACAGGGCGCC GTCAACCCAGACGAATTCTATGTCTATAAAAAGACGCTCAAAGCTGGCAAACCTGCCATCCTGCGCCGCACACTCGGCAC CAAACTGGTGCGCATGGTCTATTCAGACGCCCCAGGAGAGCGCGTCAAGATCGAAGATACCCCAACTGAATTACGTCACT GCTTCGCCATCAGCGACGCTGACGTACAAGAGCTGGCGAGACAAGCACTGATTATTGAGCAGCACTACGGCCGCCCGATG GACATTGAATGGGCTAAGGATGGGATCAGCGGCAAATTATTTATTGTGCAGGCACGTCCGGAGACAGTGAAATCACGCAG TCACACCACCCAGATTGAACGCTTTGCACTCCAACAACCCGGCCAGATACTGACAGAGGGACGTGCCATCGGCCAGAAGA TCGGCAGCGGCACAGCCCGTGTGGTGAACTCACTTGAGGACATGCACCACATGCAACCCGGCGATGTCCTGGTTGCAGAC ATGACCGACCCAGACTGGGAGCCAGTCATGAAACGCGCCAGCGCGATTGTCACCAATCGCGGCGGACGTACCTGCCACGC CGCCATTATCGCCCGTGAGCTGGGAGTACCCGCAGTGGTTGGCACCGGCAATGCGCTATCAATCATTCAAGACGGCCAAC CCATCACGGTAAGCTGCGCCGAAGGTGACACCGGCTATATCTACGCCGGGAAACTACCGTTCGAACGCACCACAACAGAC CTCGGCCACATGCCACCAGCGCCGCTAAAAATCATGATGAATGTTGCCAATCCGGAACGTGCGTTCGACTTTGGGCAACT CCCGAATGCCGGTATCGGCTTGGCACGCCTGGAAATGATCATCGCCGCACACATCGGCGTGCACCCAAAAGCACTTCTGG AATACCACAAACAAGATGCTGACACGAAACAGAAGATTGACGCCAAGATTGCCGGTTATCCTGATCCAGTCAGCTTCTAC GTCAACCGCCTCGCCGAAGGTATTGCGACCCTGACCGCCTCAGTCGCACCCCATACGGTCATCGTGCGCCTGTCGGACTT CAAATCCAACGAATACGCACACCTGATCGGTGGCCAGCACTATGAGCCACAAGAAGAAAACCCGATGCTCGGCTTCCGCG GTGCCAGCCGTTACGTCGACCCTTCATTCAGCGATGCCTTCGCATTAGAGTGCAAAGCAGTACTAAAAGTCCGTAACGAG ATGGGTCTAGATAACCTCTGGGTGATGATTCCATTTGTACGCACTTTGGAAGAAGGTCGCAAAGTGATCGACGTACTGCG ACAAAATGGCTTAAAACAGGGAGAAAATGGTTTAAAAGTGATCATGATGTGCGAAGTGCCCTCCAACGCACTGCTGGCTG ATGAATTCCTGGATATCTTCGACGGCTTCTCAATCGGCTCCAACGATCTCACCCAACTTTCCCTAGGTCTGGACCGCGAC TCCTCCATCGTCGCCCCTCTATTTGACGAGCGCAATCCAGCCGTCAAAAAACTACTGTCAATGGCAATAAAAGCGGCACG TTCCAAGGGAAAATACATTGGAATCTGCGGCCAAGGCCCATCCGATCATCCAGACTTGGCCGAATGGCTGATGCAAGAAG GCATAGAATCCCTGTCACTGAACCCAGATACCGTCGTCGATACTTGGCTACGCTTGGCAAAACTAAAAACGGTGCACTAA
Upstream 100 bases:
>100_bases CCGAGACATCTCACCAATTTAAGCTTGTGCAGTCTTGCCTATGCACTGCATCATACGACCACTTTAATACGGACGCGGCC ATACAGCCCTCCTCCAGGCG
Downstream 100 bases:
>100_bases ATGGACTGGACTAAATTACTATCAAACATCGTATCGCCTGCAACAGTGACGACGTTCCACGGCAGATTCAACTGGACACG GATCGACTGGATCCACATCC
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 799; Mature: 798
Protein sequence:
>799_residues MALNGASYLNENILWLHELRLTDLARVGGKNSSLGEMIGNLTALGVSVPGGYATTAAAFKAFIAYNNLSKRIYDKLATLD VEDVKALTAAGKEIRDWVIDAPLQPELEKDIRDAYDTLSKDNSGNDVAVAVRSSATAEDLPDASFAGQQETFLNVIGADQ VVHKIKEVFASLYNDRAIAYRVHHGFKHEDVFLSAGIQLMVRSDISASGVLFTLDTESGFREVVFVTASFGLGEMVVQGA VNPDEFYVYKKTLKAGKPAILRRTLGTKLVRMVYSDAPGERVKIEDTPTELRHCFAISDADVQELARQALIIEQHYGRPM DIEWAKDGISGKLFIVQARPETVKSRSHTTQIERFALQQPGQILTEGRAIGQKIGSGTARVVNSLEDMHHMQPGDVLVAD MTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGTGNALSIIQDGQPITVSCAEGDTGYIYAGKLPFERTTTD LGHMPPAPLKIMMNVANPERAFDFGQLPNAGIGLARLEMIIAAHIGVHPKALLEYHKQDADTKQKIDAKIAGYPDPVSFY VNRLAEGIATLTASVAPHTVIVRLSDFKSNEYAHLIGGQHYEPQEENPMLGFRGASRYVDPSFSDAFALECKAVLKVRNE MGLDNLWVMIPFVRTLEEGRKVIDVLRQNGLKQGENGLKVIMMCEVPSNALLADEFLDIFDGFSIGSNDLTQLSLGLDRD SSIVAPLFDERNPAVKKLLSMAIKAARSKGKYIGICGQGPSDHPDLAEWLMQEGIESLSLNPDTVVDTWLRLAKLKTVH
Sequences:
>Translated_799_residues MALNGASYLNENILWLHELRLTDLARVGGKNSSLGEMIGNLTALGVSVPGGYATTAAAFKAFIAYNNLSKRIYDKLATLD VEDVKALTAAGKEIRDWVIDAPLQPELEKDIRDAYDTLSKDNSGNDVAVAVRSSATAEDLPDASFAGQQETFLNVIGADQ VVHKIKEVFASLYNDRAIAYRVHHGFKHEDVFLSAGIQLMVRSDISASGVLFTLDTESGFREVVFVTASFGLGEMVVQGA VNPDEFYVYKKTLKAGKPAILRRTLGTKLVRMVYSDAPGERVKIEDTPTELRHCFAISDADVQELARQALIIEQHYGRPM DIEWAKDGISGKLFIVQARPETVKSRSHTTQIERFALQQPGQILTEGRAIGQKIGSGTARVVNSLEDMHHMQPGDVLVAD MTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGTGNALSIIQDGQPITVSCAEGDTGYIYAGKLPFERTTTD LGHMPPAPLKIMMNVANPERAFDFGQLPNAGIGLARLEMIIAAHIGVHPKALLEYHKQDADTKQKIDAKIAGYPDPVSFY VNRLAEGIATLTASVAPHTVIVRLSDFKSNEYAHLIGGQHYEPQEENPMLGFRGASRYVDPSFSDAFALECKAVLKVRNE MGLDNLWVMIPFVRTLEEGRKVIDVLRQNGLKQGENGLKVIMMCEVPSNALLADEFLDIFDGFSIGSNDLTQLSLGLDRD SSIVAPLFDERNPAVKKLLSMAIKAARSKGKYIGICGQGPSDHPDLAEWLMQEGIESLSLNPDTVVDTWLRLAKLKTVH >Mature_798_residues ALNGASYLNENILWLHELRLTDLARVGGKNSSLGEMIGNLTALGVSVPGGYATTAAAFKAFIAYNNLSKRIYDKLATLDV EDVKALTAAGKEIRDWVIDAPLQPELEKDIRDAYDTLSKDNSGNDVAVAVRSSATAEDLPDASFAGQQETFLNVIGADQV VHKIKEVFASLYNDRAIAYRVHHGFKHEDVFLSAGIQLMVRSDISASGVLFTLDTESGFREVVFVTASFGLGEMVVQGAV NPDEFYVYKKTLKAGKPAILRRTLGTKLVRMVYSDAPGERVKIEDTPTELRHCFAISDADVQELARQALIIEQHYGRPMD IEWAKDGISGKLFIVQARPETVKSRSHTTQIERFALQQPGQILTEGRAIGQKIGSGTARVVNSLEDMHHMQPGDVLVADM TDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGTGNALSIIQDGQPITVSCAEGDTGYIYAGKLPFERTTTDL GHMPPAPLKIMMNVANPERAFDFGQLPNAGIGLARLEMIIAAHIGVHPKALLEYHKQDADTKQKIDAKIAGYPDPVSFYV NRLAEGIATLTASVAPHTVIVRLSDFKSNEYAHLIGGQHYEPQEENPMLGFRGASRYVDPSFSDAFALECKAVLKVRNEM GLDNLWVMIPFVRTLEEGRKVIDVLRQNGLKQGENGLKVIMMCEVPSNALLADEFLDIFDGFSIGSNDLTQLSLGLDRDS SIVAPLFDERNPAVKKLLSMAIKAARSKGKYIGICGQGPSDHPDLAEWLMQEGIESLSLNPDTVVDTWLRLAKLKTVH
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=798, Percent_Identity=63.7844611528822, Blast_Score=1074, Evalue=0.0, Organism=Escherichia coli, GI1788726, Length=163, Percent_Identity=36.8098159509202, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1788756, Length=396, Percent_Identity=25.7575757575758, Blast_Score=106, Evalue=5e-24, Organism=Escherichia coli, GI48994992, Length=162, Percent_Identity=32.7160493827161, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1789193, Length=403, Percent_Identity=23.5732009925558, Blast_Score=86, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17564524, Length=397, Percent_Identity=25.1889168765743, Blast_Score=85, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 87319; Mature: 87188
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNGASYLNENILWLHELRLTDLARVGGKNSSLGEMIGNLTALGVSVPGGYATTAAAFK CCCCCHHHHCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHCHHEEEEECCCCHHHHHHHHH AFIAYNNLSKRIYDKLATLDVEDVKALTAAGKEIRDWVIDAPLQPELEKDIRDAYDTLSK HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCC DNSGNDVAVAVRSSATAEDLPDASFAGQQETFLNVIGADQVVHKIKEVFASLYNDRAIAY CCCCCEEEEEEECCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE RVHHGFKHEDVFLSAGIQLMVRSDISASGVLFTLDTESGFREVVFVTASFGLGEMVVQGA EECCCCCCCCEEEECCEEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHCC VNPDEFYVYKKTLKAGKPAILRRTLGTKLVRMVYSDAPGERVKIEDTPTELRHCFAISDA CCCHHEEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCC DVQELARQALIIEQHYGRPMDIEWAKDGISGKLFIVQARPETVKSRSHTTQIERFALQQP HHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEEECCCHHHHCCHHHHHHHHHHHCCC GQILTEGRAIGQKIGSGTARVVNSLEDMHHMQPGDVLVADMTDPDWEPVMKRASAIVTNR CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC GGRTCHAAIIARELGVPAVVGTGNALSIIQDGQPITVSCAEGDTGYIYAGKLPFERTTTD CCCCHHHHHHHHHCCCCEEEECCCEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCCH LGHMPPAPLKIMMNVANPERAFDFGQLPNAGIGLARLEMIIAAHIGVHPKALLEYHKQDA HCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCC DTKQKIDAKIAGYPDPVSFYVNRLAEGIATLTASVAPHTVIVRLSDFKSNEYAHLIGGQH CHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEECCCCC YEPQEENPMLGFRGASRYVDPSFSDAFALECKAVLKVRNEMGLDNLWVMIPFVRTLEEGR CCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH KVIDVLRQNGLKQGENGLKVIMMCEVPSNALLADEFLDIFDGFSIGSNDLTQLSLGLDRD HHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCC SSIVAPLFDERNPAVKKLLSMAIKAARSKGKYIGICGQGPSDHPDLAEWLMQEGIESLSL CCEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCHHHCCC NPDTVVDTWLRLAKLKTVH CCHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALNGASYLNENILWLHELRLTDLARVGGKNSSLGEMIGNLTALGVSVPGGYATTAAAFK CCCCHHHHCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHCHHEEEEECCCCHHHHHHHHH AFIAYNNLSKRIYDKLATLDVEDVKALTAAGKEIRDWVIDAPLQPELEKDIRDAYDTLSK HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCC DNSGNDVAVAVRSSATAEDLPDASFAGQQETFLNVIGADQVVHKIKEVFASLYNDRAIAY CCCCCEEEEEEECCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE RVHHGFKHEDVFLSAGIQLMVRSDISASGVLFTLDTESGFREVVFVTASFGLGEMVVQGA EECCCCCCCCEEEECCEEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHCC VNPDEFYVYKKTLKAGKPAILRRTLGTKLVRMVYSDAPGERVKIEDTPTELRHCFAISDA CCCHHEEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCC DVQELARQALIIEQHYGRPMDIEWAKDGISGKLFIVQARPETVKSRSHTTQIERFALQQP HHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEEECCCHHHHCCHHHHHHHHHHHCCC GQILTEGRAIGQKIGSGTARVVNSLEDMHHMQPGDVLVADMTDPDWEPVMKRASAIVTNR CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC GGRTCHAAIIARELGVPAVVGTGNALSIIQDGQPITVSCAEGDTGYIYAGKLPFERTTTD CCCCHHHHHHHHHCCCCEEEECCCEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCCH LGHMPPAPLKIMMNVANPERAFDFGQLPNAGIGLARLEMIIAAHIGVHPKALLEYHKQDA HCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCC DTKQKIDAKIAGYPDPVSFYVNRLAEGIATLTASVAPHTVIVRLSDFKSNEYAHLIGGQH CHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEECCCCC YEPQEENPMLGFRGASRYVDPSFSDAFALECKAVLKVRNEMGLDNLWVMIPFVRTLEEGR CCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH KVIDVLRQNGLKQGENGLKVIMMCEVPSNALLADEFLDIFDGFSIGSNDLTQLSLGLDRD HHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCC SSIVAPLFDERNPAVKKLLSMAIKAARSKGKYIGICGQGPSDHPDLAEWLMQEGIESLSL CCEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCHHHCCC NPDTVVDTWLRLAKLKTVH CCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1310524; 9097039; 9278503 [H]