Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681090
Identifier: 182681090
GI number: 182681090
Start: 629459
End: 630334
Strand: Direct
Name: 182681090
Synonym: XfasM23_0532
Alternate gene names: NA
Gene position: 629459-630334 (Clockwise)
Preceding gene: 182681089
Following gene: 182681091
Centisome position: 24.82
GC content: 52.97
Gene sequence:
>876_bases ATGAGGCACCGGCGCGTTCCTGGCGCGTGCATTGATGGCATGACCTGGGCGCCTGGTGTGCCTGAGCTGGTCGATACCGT ATACGTACGCCATTGTTCTGGCGTGCGTAGTTCCGTCTCGCTCAAATCTTTTGAACAGGGAGGTGAAAAATGGCAGGCCG ATCCAGTCGATTGGATCTGGTTTGACGAGCAACCGCCCGAAGATGTGTACTTCGAGGGCATCATCCGCACTAATCGCACC TTTGGGCTGGTGTGCATGACGTTTGCGCCGCTAAAAAGCATATTAACCGTGGTGTGGCGCTTTCTGCTGGAAAACGTTCC GGACCGAGCAGATGTGCAAATGATCATTGAAGATGCCGAACACTATTTGCTCGAAGACTGCGCGCGTATCACTGCAAGCT ACCCACCGTATGAGCGCCAAGCACGTACTCAAGGCGTTCCAGCATTAGGGAGCGGTCGCCTATTCCCCATCGCGGGAGAA AAAATCGGCGTTGCTCCGGAAAAAAATTTGAAGAAGGTAAGCAACGCGCTCCGAATCGCCTTATCGGCCAAACCATCAAC GCATCAGATGCCGCACAGCGTGACATGTCTCTATGGGCACGCATTGACGCCGATCCGAAACACTTTTGTTAGGCTCAAAA CGGCAAGCGTCCCAGACACACACGCTGAGGCTGAAGCCGAAGCGTGTGCTGATGTGTTGGAAATGAATTTGCAAAAGGTC ACCGAGTCCGCATCCAGAAACGACAAGGGACTGGTGCGTCTTGGGGCGAACATCGTGAAAGGCTTCGCAGAGGTAGAACA ACGTTTAGGCAACGTAGAACAACGCTATCACACAGATAGAAAAACGCTTCGTACAGCCAGATCAACGTTTCATTGA
Upstream 100 bases:
>100_bases TTTTACTAGTGCTCATCACGGTTTACCCGGTTCTGAAACGGGAGAGTTAACGCACCGGCAGTGTGCAACGCCTCTTGCTC GGCCGTGATCCGAAAACCGA
Downstream 100 bases:
>100_bases AATACAAAGGTGAAATGCTGTTACTTCAATGGATGCTTGGCGTGAGTGTTGTCTGCATCGCCACGTTTATCATCAAAGCG TTGTTCTGAGTCATGCCAGC
Product: bacteriophage terminase large (ATPase) subunit-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MRHRRVPGACIDGMTWAPGVPELVDTVYVRHCSGVRSSVSLKSFEQGGEKWQADPVDWIWFDEQPPEDVYFEGIIRTNRT FGLVCMTFAPLKSILTVVWRFLLENVPDRADVQMIIEDAEHYLLEDCARITASYPPYERQARTQGVPALGSGRLFPIAGE KIGVAPEKNLKKVSNALRIALSAKPSTHQMPHSVTCLYGHALTPIRNTFVRLKTASVPDTHAEAEAEACADVLEMNLQKV TESASRNDKGLVRLGANIVKGFAEVEQRLGNVEQRYHTDRKTLRTARSTFH
Sequences:
>Translated_291_residues MRHRRVPGACIDGMTWAPGVPELVDTVYVRHCSGVRSSVSLKSFEQGGEKWQADPVDWIWFDEQPPEDVYFEGIIRTNRT FGLVCMTFAPLKSILTVVWRFLLENVPDRADVQMIIEDAEHYLLEDCARITASYPPYERQARTQGVPALGSGRLFPIAGE KIGVAPEKNLKKVSNALRIALSAKPSTHQMPHSVTCLYGHALTPIRNTFVRLKTASVPDTHAEAEAEACADVLEMNLQKV TESASRNDKGLVRLGANIVKGFAEVEQRLGNVEQRYHTDRKTLRTARSTFH >Mature_291_residues MRHRRVPGACIDGMTWAPGVPELVDTVYVRHCSGVRSSVSLKSFEQGGEKWQADPVDWIWFDEQPPEDVYFEGIIRTNRT FGLVCMTFAPLKSILTVVWRFLLENVPDRADVQMIIEDAEHYLLEDCARITASYPPYERQARTQGVPALGSGRLFPIAGE KIGVAPEKNLKKVSNALRIALSAKPSTHQMPHSVTCLYGHALTPIRNTFVRLKTASVPDTHAEAEAEACADVLEMNLQKV TESASRNDKGLVRLGANIVKGFAEVEQRLGNVEQRYHTDRKTLRTARSTFH
Specific function: Unknown
COG id: COG5565
COG function: function code R; Bacteriophage terminase large (ATPase) subunit and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32585; Mature: 32585
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHRRVPGACIDGMTWAPGVPELVDTVYVRHCSGVRSSVSLKSFEQGGEKWQADPVDWIW CCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEE FDEQPPEDVYFEGIIRTNRTFGLVCMTFAPLKSILTVVWRFLLENVPDRADVQMIIEDAE ECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH HYLLEDCARITASYPPYERQARTQGVPALGSGRLFPIAGEKIGVAPEKNLKKVSNALRIA HHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHEEE LSAKPSTHQMPHSVTCLYGHALTPIRNTFVRLKTASVPDTHAEAEAEACADVLEMNLQKV EECCCCCCCCCCCEEEECCCHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH TESASRNDKGLVRLGANIVKGFAEVEQRLGNVEQRYHTDRKTLRTARSTFH HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRHRRVPGACIDGMTWAPGVPELVDTVYVRHCSGVRSSVSLKSFEQGGEKWQADPVDWIW CCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEE FDEQPPEDVYFEGIIRTNRTFGLVCMTFAPLKSILTVVWRFLLENVPDRADVQMIIEDAE ECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH HYLLEDCARITASYPPYERQARTQGVPALGSGRLFPIAGEKIGVAPEKNLKKVSNALRIA HHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHEEE LSAKPSTHQMPHSVTCLYGHALTPIRNTFVRLKTASVPDTHAEAEAEACADVLEMNLQKV EECCCCCCCCCCCEEEECCCHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH TESASRNDKGLVRLGANIVKGFAEVEQRLGNVEQRYHTDRKTLRTARSTFH HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA