| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681087
Identifier: 182681087
GI number: 182681087
Start: 628529
End: 628867
Strand: Direct
Name: 182681087
Synonym: XfasM23_0529
Alternate gene names: NA
Gene position: 628529-628867 (Clockwise)
Preceding gene: 182681086
Following gene: 182681088
Centisome position: 24.79
GC content: 47.79
Gene sequence:
>339_bases GTGAGCTTTAAACATGAAGTAGAGATTGACCCATACGCCGAAGCACACGAGCCGTACCCCTTGATTCTTGCTGAAAAAGT ACAAATCGATTGCTACATAAGGCTGCGCGTACCCCGCACGATAGACGTATGTTTGTCTTCCCTCCAGTTAACAGGGACGG ATACAACGCACGTTGCTGTGGAGTTAAAAAAACCACAAGGTAACCGGCCGCTTACGTTCGGTTTTGTGCTTACCGGGAAA TGCCGGGGCAACACTACAATCACCGCGAAAATGGAATTAACGAACGGCGTTGTTAGTAAACGCACCTTTCATGTTGTTGT ACGGTCATGCTGTGGTTAA
Upstream 100 bases:
>100_bases GAGAAAGCAACGATGAATGCGGAACAACATGCCGCAATCGCGCAATTACTTTTGTTACGCAACAGCGACAGCCGCGCCGT GGCAGTGCCGAGGTGCGCCC
Downstream 100 bases:
>100_bases AAAGCACCTCTTGGAACCTGGGTTGTAGGCTTGCTGGCAGTAAAAATCGCAACACTGCGACGATTAAAAACGCGTTTCTT GAGGCCCTCGACTACCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSFKHEVEIDPYAEAHEPYPLILAEKVQIDCYIRLRVPRTIDVCLSSLQLTGTDTTHVAVELKKPQGNRPLTFGFVLTGK CRGNTTITAKMELTNGVVSKRTFHVVVRSCCG
Sequences:
>Translated_112_residues MSFKHEVEIDPYAEAHEPYPLILAEKVQIDCYIRLRVPRTIDVCLSSLQLTGTDTTHVAVELKKPQGNRPLTFGFVLTGK CRGNTTITAKMELTNGVVSKRTFHVVVRSCCG >Mature_111_residues SFKHEVEIDPYAEAHEPYPLILAEKVQIDCYIRLRVPRTIDVCLSSLQLTGTDTTHVAVELKKPQGNRPLTFGFVLTGKC RGNTTITAKMELTNGVVSKRTFHVVVRSCCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12491; Mature: 12360
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFKHEVEIDPYAEAHEPYPLILAEKVQIDCYIRLRVPRTIDVCLSSLQLTGTDTTHVAV CCCCCCEEECCCCCCCCCEEEEEEEEEEEEEEEEEECCCCHHHHHCEEEECCCCCEEEEE ELKKPQGNRPLTFGFVLTGKCRGNTTITAKMELTNGVVSKRTFHVVVRSCCG EEECCCCCCCEEEEEEEEEEECCCEEEEEEEEECCCCCCCHHHEEEHHHHCC >Mature Secondary Structure SFKHEVEIDPYAEAHEPYPLILAEKVQIDCYIRLRVPRTIDVCLSSLQLTGTDTTHVAV CCCCCEEECCCCCCCCCEEEEEEEEEEEEEEEEEECCCCHHHHHCEEEECCCCCEEEEE ELKKPQGNRPLTFGFVLTGKCRGNTTITAKMELTNGVVSKRTFHVVVRSCCG EEECCCCCCCEEEEEEEEEEECCCEEEEEEEEECCCCCCCHHHEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA