Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182681079
Identifier: 182681079
GI number: 182681079
Start: 625732
End: 625995
Strand: Reverse
Name: 182681079
Synonym: XfasM23_0521
Alternate gene names: NA
Gene position: 625995-625732 (Counterclockwise)
Preceding gene: 182681080
Following gene: 182681078
Centisome position: 24.69
GC content: 32.58
Gene sequence:
>264_bases ATGTCTAAGTTAGCTCCTTTAGATTCTGATCCTCTTTCGGCTCAGCAGTATATTTCTCTTATGAGTACATCTTTTTCTAC TATTGAATCTAATGTTGAGATTATTCAAGGTGTTTTAGTGCGCATGTATCGTATTACTTCTAAGGTTTCAGATGAGTTTA TATTCGATAAGATTCATTTAATGTATATCAATACAATGGATATTGTTTCTGAGCTTGAAGAATTGAAACACCGTTTATCT TCTCTTCCTTATGCGGATTACTGA
Upstream 100 bases:
>100_bases TATAAGGAGAGGCGTTATGTCGCTGGTCGTATTAACGAAGCTGCAGAATGGGTGGCGCGTTTTCTCGGAGATGTAGATGC TGCTTTAGAGGATGATTTAA
Downstream 100 bases:
>100_bases TACTGAGCGAGGCGCACGCATGGCATTGAATATTGCTGAGATGTACGTTCGTCAATTGGATTTTTGGGAAGATACGCTAC CTCAGCAGTTTGATTTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MSKLAPLDSDPLSAQQYISLMSTSFSTIESNVEIIQGVLVRMYRITSKVSDEFIFDKIHLMYINTMDIVSELEELKHRLS SLPYADY
Sequences:
>Translated_87_residues MSKLAPLDSDPLSAQQYISLMSTSFSTIESNVEIIQGVLVRMYRITSKVSDEFIFDKIHLMYINTMDIVSELEELKHRLS SLPYADY >Mature_86_residues SKLAPLDSDPLSAQQYISLMSTSFSTIESNVEIIQGVLVRMYRITSKVSDEFIFDKIHLMYINTMDIVSELEELKHRLSS LPYADY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10009; Mature: 9877
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLAPLDSDPLSAQQYISLMSTSFSTIESNVEIIQGVLVRMYRITSKVSDEFIFDKIHL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MYINTMDIVSELEELKHRLSSLPYADY HHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SKLAPLDSDPLSAQQYISLMSTSFSTIESNVEIIQGVLVRMYRITSKVSDEFIFDKIHL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MYINTMDIVSELEELKHRLSSLPYADY HHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA