Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681073
Identifier: 182681073
GI number: 182681073
Start: 623054
End: 623305
Strand: Reverse
Name: 182681073
Synonym: XfasM23_0515
Alternate gene names: NA
Gene position: 623305-623054 (Counterclockwise)
Preceding gene: 182681074
Following gene: 182681072
Centisome position: 24.58
GC content: 46.83
Gene sequence:
>252_bases ATGGCCCTCTGCGTCTCTTTAAAAGCTGATGGTACCTTGGTAGCTACAGGTCAAGGTGTGTCTGACTGTACGGGGTATGT ATTGGTCAGCGGGTCAGAGTATGGGGTTTATCAGTTGGTGCAACGTGTGTTTGAGGTGCCTGATATAAAAACTGTTATTC AGACCTCTACCACTGTGGCTTTTACTGTGATTGGTTGGTATGTCGTGGCGCGTATTATCGGCACCGTTGCGACATTTTTT GATAGCCGATAA
Upstream 100 bases:
>100_bases TTTAGTTATTTCTTTGTTTTTGTGTTGGTGTGTAGAGTTTTTTTTTGTTGTTTTTTGTTGATTATGTTTTTTTTCTTGTC TTGGGAATGTTTGTTAAGTC
Downstream 100 bases:
>100_bases TCAATAAACGAGGTGATGTATGGCTGATATTTTATCTGGACTTGATGTTAAATCGGCGGCGGCGGCTCTCATTGGTGCTG CTGCTTTAATTGCATTGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MALCVSLKADGTLVATGQGVSDCTGYVLVSGSEYGVYQLVQRVFEVPDIKTVIQTSTTVAFTVIGWYVVARIIGTVATFF DSR
Sequences:
>Translated_83_residues MALCVSLKADGTLVATGQGVSDCTGYVLVSGSEYGVYQLVQRVFEVPDIKTVIQTSTTVAFTVIGWYVVARIIGTVATFF DSR >Mature_82_residues ALCVSLKADGTLVATGQGVSDCTGYVLVSGSEYGVYQLVQRVFEVPDIKTVIQTSTTVAFTVIGWYVVARIIGTVATFFD SR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8871; Mature: 8740
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALCVSLKADGTLVATGQGVSDCTGYVLVSGSEYGVYQLVQRVFEVPDIKTVIQTSTTVA CEEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHCCCHHH FTVIGWYVVARIIGTVATFFDSR HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALCVSLKADGTLVATGQGVSDCTGYVLVSGSEYGVYQLVQRVFEVPDIKTVIQTSTTVA EEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHCCCHHH FTVIGWYVVARIIGTVATFFDSR HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA