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The map label for this gene is ytfM [H]

Identifier: 182681065

GI number: 182681065

Start: 610019

End: 611908

Strand: Direct

Name: ytfM [H]

Synonym: XfasM23_0504

Alternate gene names: 182681065

Gene position: 610019-611908 (Clockwise)

Preceding gene: 182681060

Following gene: 182681066

Centisome position: 24.06

GC content: 53.33

Gene sequence:

>1890_bases
ATGATGCGAACGGCATGGATGCTTCACCTGCAGGATTTGGAAGTCCTTAGATGCTTCTGGAATGTGAGATTTATCACTCT
ATCCATACTGCCTCGGTATACTGCGCAAATGCTAAGACGCTTTATCCCGCCAATGTTGAGCTTATGGTTGCTCTTCGCTT
CTTTGGCTCAGGCGAACGCAACCGTAGACAAAATCCAGATCAAAGGTTTGGATAAAGGTGATGACGTTGAGATGATGAAA
AACATCACTGTCTCGTTATCGTTGTATAGCGTGGTTGGTAAGGAGCAGGGCGAATCCCGGCTGGAATACCTGCTCAGCCA
AGCCGAGTTCCAGACCCGCCAAGCCTTGGAGCCCTTTGGCTATTATGCTCCCGCCATTCGCATTGATGCCCCGCGCCAGA
ATGATCACATCACCGTGGTTATTTACGTGGACAAAGGAGAGCCGGTCCGGATACGTCAGGCGCACGTTGCGATGACAGGA
GCCGCCGCGCAGGACCATTATCTTCAGCGTGACCTGGAAGATTTCAAGCCTAAGCTTGGCGAAATATTCAACCATCCCAC
GTATGAAGCCAGCAAGGTTCGCATCACCCGGCGCTTGGCTGAGCGAGGCTATTTCGATGCCGATTTCACCCGCCGTCAGG
TCGAAGTGACCCGTGCCACGTATGCAGCAGACATTGATTTGATCTGGGAAAGCGGGCGCCGCTATGACATGGGGCCCGTT
CGCTTCCATTACGACTATTTCCACGAAGGGCTATTTAATCCACTGGTGTACTGGGAGGAAGGTAGCTATTTCCACGAAGG
CAAGCTTGATCGCCTGCGTGAGTCACTGACCAAATTGGACTATTTCAGCAGCATTGATATCCAACCAAAGCCCGAGGAAG
CGGACTCTGAAGGCAATGTTCCCGTTGATGTCAAGCTGGAACGCGCCAAAAGCAAAATCTACACGGCGGGCATCAGCTAT
GGCAGCGAAAGTGGTGCCGGTCTGCGTGCTGGTGTTGAGCGACGTTACATGAATGCGCGTGGACACAAAATGAATGCACG
ATTGGACTATGCCCAGAATCGCAAAAGCCTCACCACGGCCTATCAAATCCCCGCGTTCAAATGGCTGGATGGTTGGTACA
TATTCTCCGCACGTGCCTATGATGAGCAGACCCAGTACATCGACTTGCGTAACGTGAAGCTATCGGCGGCACGTAGCGGT
CAGATCAACCGACATTTGACCGCAACCGCCTCACTGAACGCGCTACGGGAGCGTTGGCGTTATGCGGCCGATGACGGCAC
CAATACAGTGGCTTACCAGCATTCCACGCTGGTCTACCCACAATTGGAAGCCAGTTATGTTGATGTTGACGATGCCACCT
TCCCCCGCAATGGGAGCGCCGCCACAGTGCTCCTGCGTGGTGGTGCCAGTGCATTTGGTTCCAAAAGTAACTTTACCCAG
CTTCATGGCCAACTGCGTTGGTTTCATGGATTGGGGTCCAGCAGCCGCCTCATCTTACGTGGAGAGGTCGGTACCACCTG
GGCCAGCGATTTGGTCGCAATGCCGCCAAGCTTGCGTTTCTTTGCTGGAGGCGTTAACAGCATTCGTGGTTACGCTTTCC
GCGAGGTTGGTCCACGTACTGCCAAACCGGATGCCTTCGCACTCGGTGCCAAACATGTTTTCAGTGCTGGCGCTGAATAT
GAGTACTACTACAAAGGAGGACCCTTTGGTGGCGCCGTGTTCGTGGATAGCGGCAGTGCGTTCAATCGCTATCCGGATTG
GCATACCGGCATTGGTATTGGCTTGCGTTACCGCTCCCCGGTAGGTCCAGTACGTGTGGATATTGCGCGTGGCTTGAACA
AACCCGATTCCAAGATTCAACTGTATATCGACATTGGGGCCAATCTGTGA

Upstream 100 bases:

>100_bases
CTTGTCTCCAAGCTTGGACACCCCTTAGGGCTGCTGTTTTCTCCATCAACCTTCGCTGCTACTTTCGGTGTGTTAAAGAA
ACTACGTTGTACCGTGCCAT

Downstream 100 bases:

>100_bases
ATGCTCCTCAGCCCATTGGTGCCCTGCGTCGGCACCGTCTATGGTTTGGTATAGGGTTGATTGCCACTGGCCTATTTCTC
ACACTGCTGGCGTTGCTGTA

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 629; Mature: 629

Protein sequence:

>629_residues
MMRTAWMLHLQDLEVLRCFWNVRFITLSILPRYTAQMLRRFIPPMLSLWLLFASLAQANATVDKIQIKGLDKGDDVEMMK
NITVSLSLYSVVGKEQGESRLEYLLSQAEFQTRQALEPFGYYAPAIRIDAPRQNDHITVVIYVDKGEPVRIRQAHVAMTG
AAAQDHYLQRDLEDFKPKLGEIFNHPTYEASKVRITRRLAERGYFDADFTRRQVEVTRATYAADIDLIWESGRRYDMGPV
RFHYDYFHEGLFNPLVYWEEGSYFHEGKLDRLRESLTKLDYFSSIDIQPKPEEADSEGNVPVDVKLERAKSKIYTAGISY
GSESGAGLRAGVERRYMNARGHKMNARLDYAQNRKSLTTAYQIPAFKWLDGWYIFSARAYDEQTQYIDLRNVKLSAARSG
QINRHLTATASLNALRERWRYAADDGTNTVAYQHSTLVYPQLEASYVDVDDATFPRNGSAATVLLRGGASAFGSKSNFTQ
LHGQLRWFHGLGSSSRLILRGEVGTTWASDLVAMPPSLRFFAGGVNSIRGYAFREVGPRTAKPDAFALGAKHVFSAGAEY
EYYYKGGPFGGAVFVDSGSAFNRYPDWHTGIGIGLRYRSPVGPVRVDIARGLNKPDSKIQLYIDIGANL

Sequences:

>Translated_629_residues
MMRTAWMLHLQDLEVLRCFWNVRFITLSILPRYTAQMLRRFIPPMLSLWLLFASLAQANATVDKIQIKGLDKGDDVEMMK
NITVSLSLYSVVGKEQGESRLEYLLSQAEFQTRQALEPFGYYAPAIRIDAPRQNDHITVVIYVDKGEPVRIRQAHVAMTG
AAAQDHYLQRDLEDFKPKLGEIFNHPTYEASKVRITRRLAERGYFDADFTRRQVEVTRATYAADIDLIWESGRRYDMGPV
RFHYDYFHEGLFNPLVYWEEGSYFHEGKLDRLRESLTKLDYFSSIDIQPKPEEADSEGNVPVDVKLERAKSKIYTAGISY
GSESGAGLRAGVERRYMNARGHKMNARLDYAQNRKSLTTAYQIPAFKWLDGWYIFSARAYDEQTQYIDLRNVKLSAARSG
QINRHLTATASLNALRERWRYAADDGTNTVAYQHSTLVYPQLEASYVDVDDATFPRNGSAATVLLRGGASAFGSKSNFTQ
LHGQLRWFHGLGSSSRLILRGEVGTTWASDLVAMPPSLRFFAGGVNSIRGYAFREVGPRTAKPDAFALGAKHVFSAGAEY
EYYYKGGPFGGAVFVDSGSAFNRYPDWHTGIGIGLRYRSPVGPVRVDIARGLNKPDSKIQLYIDIGANL
>Mature_629_residues
MMRTAWMLHLQDLEVLRCFWNVRFITLSILPRYTAQMLRRFIPPMLSLWLLFASLAQANATVDKIQIKGLDKGDDVEMMK
NITVSLSLYSVVGKEQGESRLEYLLSQAEFQTRQALEPFGYYAPAIRIDAPRQNDHITVVIYVDKGEPVRIRQAHVAMTG
AAAQDHYLQRDLEDFKPKLGEIFNHPTYEASKVRITRRLAERGYFDADFTRRQVEVTRATYAADIDLIWESGRRYDMGPV
RFHYDYFHEGLFNPLVYWEEGSYFHEGKLDRLRESLTKLDYFSSIDIQPKPEEADSEGNVPVDVKLERAKSKIYTAGISY
GSESGAGLRAGVERRYMNARGHKMNARLDYAQNRKSLTTAYQIPAFKWLDGWYIFSARAYDEQTQYIDLRNVKLSAARSG
QINRHLTATASLNALRERWRYAADDGTNTVAYQHSTLVYPQLEASYVDVDDATFPRNGSAATVLLRGGASAFGSKSNFTQ
LHGQLRWFHGLGSSSRLILRGEVGTTWASDLVAMPPSLRFFAGGVNSIRGYAFREVGPRTAKPDAFALGAKHVFSAGAEY
EYYYKGGPFGGAVFVDSGSAFNRYPDWHTGIGIGLRYRSPVGPVRVDIARGLNKPDSKIQLYIDIGANL

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0698 [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=597, Percent_Identity=27.4706867671692, Blast_Score=216, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 71189; Mature: 71189

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRTAWMLHLQDLEVLRCFWNVRFITLSILPRYTAQMLRRFIPPMLSLWLLFASLAQANA
CCCCEEEEEHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TVDKIQIKGLDKGDDVEMMKNITVSLSLYSVVGKEQGESRLEYLLSQAEFQTRQALEPFG
CEEEEEEECCCCCCCHHHHHCEEEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
YYAPAIRIDAPRQNDHITVVIYVDKGEPVRIRQAHVAMTGAAAQDHYLQRDLEDFKPKLG
CCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCHHHH
EIFNHPTYEASKVRITRRLAERGYFDADFTRRQVEVTRATYAADIDLIWESGRRYDMGPV
HHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHEEEEEHHHHEEEEEEEECCCCCCCCCCE
RFHYDYFHEGLFNPLVYWEEGSYFHEGKLDRLRESLTKLDYFSSIDIQPKPEEADSEGNV
EEEHHHHHCCCCCCEEEEECCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PVDVKLERAKSKIYTAGISYGSESGAGLRAGVERRYMNARGHKMNARLDYAQNRKSLTTA
CEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECHHCCCCHHEEE
YQIPAFKWLDGWYIFSARAYDEQTQYIDLRNVKLSAARSGQINRHLTATASLNALRERWR
EECCCEEEECCEEEEEEECCCCCCCEEEEECEEEECCCCCCCCEEEEEHHHHHHHHHHHC
YAADDGTNTVAYQHSTLVYPQLEASYVDVDDATFPRNGSAATVLLRGGASAFGSKSNFTQ
CCCCCCCCEEEEECCEEEEECCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHH
LHGQLRWFHGLGSSSRLILRGEVGTTWASDLVAMPPSLRFFAGGVNSIRGYAFREVGPRT
HHCEEEEEECCCCCCEEEEECCCCCCHHHHHHCCCCCCEEEECCCHHHCCEEEECCCCCC
AKPDAFALGAKHVFSAGAEYEYYYKGGPFGGAVFVDSGSAFNRYPDWHTGIGIGLRYRSP
CCCCCEECCHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCC
VGPVRVDIARGLNKPDSKIQLYIDIGANL
CCCEEEEHHHCCCCCCCEEEEEEEECCCC
>Mature Secondary Structure
MMRTAWMLHLQDLEVLRCFWNVRFITLSILPRYTAQMLRRFIPPMLSLWLLFASLAQANA
CCCCEEEEEHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TVDKIQIKGLDKGDDVEMMKNITVSLSLYSVVGKEQGESRLEYLLSQAEFQTRQALEPFG
CEEEEEEECCCCCCCHHHHHCEEEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
YYAPAIRIDAPRQNDHITVVIYVDKGEPVRIRQAHVAMTGAAAQDHYLQRDLEDFKPKLG
CCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCHHHH
EIFNHPTYEASKVRITRRLAERGYFDADFTRRQVEVTRATYAADIDLIWESGRRYDMGPV
HHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHEEEEEHHHHEEEEEEEECCCCCCCCCCE
RFHYDYFHEGLFNPLVYWEEGSYFHEGKLDRLRESLTKLDYFSSIDIQPKPEEADSEGNV
EEEHHHHHCCCCCCEEEEECCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PVDVKLERAKSKIYTAGISYGSESGAGLRAGVERRYMNARGHKMNARLDYAQNRKSLTTA
CEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECHHCCCCHHEEE
YQIPAFKWLDGWYIFSARAYDEQTQYIDLRNVKLSAARSGQINRHLTATASLNALRERWR
EECCCEEEECCEEEEEEECCCCCCCEEEEECEEEECCCCCCCCEEEEEHHHHHHHHHHHC
YAADDGTNTVAYQHSTLVYPQLEASYVDVDDATFPRNGSAATVLLRGGASAFGSKSNFTQ
CCCCCCCCEEEEECCEEEEECCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHH
LHGQLRWFHGLGSSSRLILRGEVGTTWASDLVAMPPSLRFFAGGVNSIRGYAFREVGPRT
HHCEEEEEECCCCCCEEEEECCCCCCHHHHHHCCCCCCEEEECCCHHHCCEEEECCCCCC
AKPDAFALGAKHVFSAGAEYEYYYKGGPFGGAVFVDSGSAFNRYPDWHTGIGIGLRYRSP
CCCCCEECCHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCC
VGPVRVDIARGLNKPDSKIQLYIDIGANL
CCCEEEEHHHCCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]