Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681059
Identifier: 182681059
GI number: 182681059
Start: 604200
End: 604688
Strand: Reverse
Name: 182681059
Synonym: XfasM23_0498
Alternate gene names: NA
Gene position: 604688-604200 (Counterclockwise)
Preceding gene: 182681061
Following gene: 182681057
Centisome position: 23.85
GC content: 45.4
Gene sequence:
>489_bases ATGCTGCGTTTCGCTACAGCTGGGTTTTTCTATGTATTGTTGACTCCTATGGTGAAGGCTTCCACACCTCATTATTCTGT CAATACCCCTTTTAATCAATCGACCCCAACGACGGTGGTTACACCGATCAACACGATGTTCTACAACCCCCAAACCCCAT TAGGCATACCGGGCAAAGCACTGTCACAACGTTACAACAGAGAGTATTTAATGGACCCCATGTTGCTGCACTTGCGGGTA AATAGTCGCCAAAGTATCGCAAAAACGAAAACGACTTCAACCGAAAGTACAGCCAACTCAAATAACAAAACAGAAACCGA TTACAAGAAACAAACCATTTACGACAACACACCCTGGCGCTTCAACATGAACCAACAAGGTAAGCGCATGACAGCCGATG AGTTCGACGCATGGATGAAAGCGCGTGGAGTGCATGTTATCCCAAGCCAAACTAATAACAACGTGCAATCGGTATCTGAA GCCAAGTAA
Upstream 100 bases:
>100_bases ATTTCTCATTAGTTATTCATATCTCAATTAAAATTGATTGAAAGCACAGCGAACGCAGTCTAAACTGCAATCACTTTCCA TCCGGCGGATAAATCTTACT
Downstream 100 bases:
>100_bases TCAATGATGTCCACATACTCTGCCCTTGCCATACTAAAATCTTGATGATTGGCACGCTTTTTCTCTGACATCCCGGCTAC AGGTGTTTTTGTCACTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MLRFATAGFFYVLLTPMVKASTPHYSVNTPFNQSTPTTVVTPINTMFYNPQTPLGIPGKALSQRYNREYLMDPMLLHLRV NSRQSIAKTKTTSTESTANSNNKTETDYKKQTIYDNTPWRFNMNQQGKRMTADEFDAWMKARGVHVIPSQTNNNVQSVSE AK
Sequences:
>Translated_162_residues MLRFATAGFFYVLLTPMVKASTPHYSVNTPFNQSTPTTVVTPINTMFYNPQTPLGIPGKALSQRYNREYLMDPMLLHLRV NSRQSIAKTKTTSTESTANSNNKTETDYKKQTIYDNTPWRFNMNQQGKRMTADEFDAWMKARGVHVIPSQTNNNVQSVSE AK >Mature_162_residues MLRFATAGFFYVLLTPMVKASTPHYSVNTPFNQSTPTTVVTPINTMFYNPQTPLGIPGKALSQRYNREYLMDPMLLHLRV NSRQSIAKTKTTSTESTANSNNKTETDYKKQTIYDNTPWRFNMNQQGKRMTADEFDAWMKARGVHVIPSQTNNNVQSVSE AK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18449; Mature: 18449
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRFATAGFFYVLLTPMVKASTPHYSVNTPFNQSTPTTVVTPINTMFYNPQTPLGIPGKA CCEECCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEECHHEEECCCCCCCCCCHH LSQRYNREYLMDPMLLHLRVNSRQSIAKTKTTSTESTANSNNKTETDYKKQTIYDNTPWR HHHHHCHHHHCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHEECCCCCEE FNMNQQGKRMTADEFDAWMKARGVHVIPSQTNNNVQSVSEAK ECCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHCCCC >Mature Secondary Structure MLRFATAGFFYVLLTPMVKASTPHYSVNTPFNQSTPTTVVTPINTMFYNPQTPLGIPGKA CCEECCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEECHHEEECCCCCCCCCCHH LSQRYNREYLMDPMLLHLRVNSRQSIAKTKTTSTESTANSNNKTETDYKKQTIYDNTPWR HHHHHCHHHHCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHEECCCCCEE FNMNQQGKRMTADEFDAWMKARGVHVIPSQTNNNVQSVSEAK ECCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA