Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681026
Identifier: 182681026
GI number: 182681026
Start: 560756
End: 561217
Strand: Reverse
Name: 182681026
Synonym: XfasM23_0465
Alternate gene names: NA
Gene position: 561217-560756 (Counterclockwise)
Preceding gene: 182681041
Following gene: 182680992
Centisome position: 22.13
GC content: 46.97
Gene sequence:
>462_bases ATGAAACGCATACAAGCATTAGTCGTTCTTTCACTTCTTTTCATAGCAAACGCGCAAGCACAGCAAGGCACACTTTTCTG CCCGCAGTTACCTACTACATCCAAGCTACACTGGGATCAGAACGTCGGCATCGGCTTTCTATTCTGTAAGGCCAGCAATG AAGAGGGCCGCATGGTATTGGGCGTCATTTTAACAACGCGCGACCCTAATATCCCGATGACTCGCAATCATCGTGCCGAG AAGAGCCAAATTGGCTCTGAGAAATTTTACTGGTACAAACTTGACTTAGGTATAAAAAACACGCCAAGTCAAGAAAACCG CCGCATTACTGTGGTTACTTTAGGCAGAAAGCGCTATGCACAGATGTGGATCGACGCACAGGACGAACAGGAACTGGTAA TGATGCAATTTGTAATCAGTAAGCTCGACCTTGAATCCGCAAGCCTGGCACTACTGCCCTAA
Upstream 100 bases:
>100_bases GAACGCTGATCGGTCTATCGGGGATCACCGGTCTGACGAATACGAAACCATGGCTTATGCATTCCCATGGACAACATTAA CTATCCCGGGAATAGCATGT
Downstream 100 bases:
>100_bases ATTTACCGCTGGACCCTGAAGATCCTCTCAACCGCAAAACTAATGACATCAAGGAATCTCTTCCTATGTTTCATGCACCC TAATTACCCCTGAGCAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKRIQALVVLSLLFIANAQAQQGTLFCPQLPTTSKLHWDQNVGIGFLFCKASNEEGRMVLGVILTTRDPNIPMTRNHRAE KSQIGSEKFYWYKLDLGIKNTPSQENRRITVVTLGRKRYAQMWIDAQDEQELVMMQFVISKLDLESASLALLP
Sequences:
>Translated_153_residues MKRIQALVVLSLLFIANAQAQQGTLFCPQLPTTSKLHWDQNVGIGFLFCKASNEEGRMVLGVILTTRDPNIPMTRNHRAE KSQIGSEKFYWYKLDLGIKNTPSQENRRITVVTLGRKRYAQMWIDAQDEQELVMMQFVISKLDLESASLALLP >Mature_153_residues MKRIQALVVLSLLFIANAQAQQGTLFCPQLPTTSKLHWDQNVGIGFLFCKASNEEGRMVLGVILTTRDPNIPMTRNHRAE KSQIGSEKFYWYKLDLGIKNTPSQENRRITVVTLGRKRYAQMWIDAQDEQELVMMQFVISKLDLESASLALLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17454; Mature: 17454
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIQALVVLSLLFIANAQAQQGTLFCPQLPTTSKLHWDQNVGIGFLFCKASNEEGRMVL CCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEECCCCCEEEEEEEECCCCCCEEE GVILTTRDPNIPMTRNHRAEKSQIGSEKFYWYKLDLGIKNTPSQENRRITVVTLGRKRYA EEEEEECCCCCCCCCCCCCHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCEEE QMWIDAQDEQELVMMQFVISKLDLESASLALLP EEECCCCCCHHHHHHHHHHHHCCCCCCEEEECC >Mature Secondary Structure MKRIQALVVLSLLFIANAQAQQGTLFCPQLPTTSKLHWDQNVGIGFLFCKASNEEGRMVL CCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEECCCCCEEEEEEEECCCCCCEEE GVILTTRDPNIPMTRNHRAEKSQIGSEKFYWYKLDLGIKNTPSQENRRITVVTLGRKRYA EEEEEECCCCCCCCCCCCCHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCEEE QMWIDAQDEQELVMMQFVISKLDLESASLALLP EEECCCCCCHHHHHHHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA