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The map label for this gene is secY

Identifier: 182681014

GI number: 182681014

Start: 545985

End: 547358

Strand: Direct

Name: secY

Synonym: XfasM23_0453

Alternate gene names: 182681014

Gene position: 545985-547358 (Clockwise)

Preceding gene: 182681013

Following gene: 182681015

Centisome position: 21.53

GC content: 42.43

Gene sequence:

>1374_bases
ATGTCTCAACCTGGTCTGGGAAATTTTGGTAATCGCTTCGCTAAGTCGATCGAGCTTCGTAATCGGTTGCTTTTTCTTTT
GGGCGCTTTAATTGTTTATAGGGTTGGCTGTTACGTTCCGGTTCCTGGCGTAAATCCTGAGGCCATGCTCGCTCTGATGC
AGAAGCAAGGTGGTGGTATCGTGGACATGTTTAACATGTTTTCCGGTGGTGCTCTCCATCGCTTTAGCATTTTTGCATTA
AATGTGATGCCTTACATTTCTGCTTCTATTGTTGTCCAGTTGGCTACTCATATTTTCCCTTCCCTGAAAGCAATGCAAAA
AGAGGGTGAGTCAGGGCGGCGCAAGATAACACAGTATTCGCGCATTGGTGCTGTTATTCTAGCTGTAATTCAGGGTGGTA
GTATCGCATTAGCATTGCAAAATCAAACAGCTCCTGGCGGCGCTGCTGTGGTATATGCTCCTGGAGCTGCTTTTGTAATG
ACTGCTATTGTTGCTTTGACTGCAGGAACTGTTTTTCTGATGTGGGTTGGTGAGCAGGTTACGGAGCGGGGTATTGGCAA
TGGTGTGTCGATGATTATTTTTGCAGGTATCGTTGCTGGCCTGCCTGGGTCTGTGTTGCAAACAATTGATGCTTTCCGTA
GCGATGCATTGAGTTTGATCTCCTTATTGATAATTGTTTTTATTGTTTTATCATTCACTTTTTTCGTTGTTTTTGTTGAG
CGTGGCTTGCGTAGGATTACTGTGAACTATGCTCGGCGTGTTGAGGGTCGTAATTCTTATATGAATAAAAGTTCTTTTTT
GCCTCTCAAGCTTAATATGGCAGGTGTTATTCCCCCTATTTTCGCCTCTAGTATTTTAGCCTTTCCTGTTACCTTATCAA
TGTGGTCTGGGCAAGCTTCTTCTAATACTCTTTTTGGTGCTTGGTTGCAGCGCGTTTCTAGTGCTTTAGGTCCGGGTGAG
CCTTTGCATATGATTCTTTTTGCTGTTCTGATAATAGGCTTTGCTTTTTTTTATACAGCTCTTGTGTTTAGTTCGCAGGA
AACTGCTGATATTCTTAAAAAGTCTGGTGCATTGATTCCTGGAATCAGGCCTGGTAAGGCTACTTCCGATTACGTTGATG
GGGTTTTGACTCGTTTGACTGCGGTAGGATCTTTGTACTTAGTTATTGTATGTTTGTTGCCAGAATTCATGCAGTCCAGG
ATGGGCGCTTCCTTTCATTTCGGTGGCACTTCTTTGCTGATTGCTGTTGTGGTTGTTATGGATTTTATTTCTCAAATACA
AGTTCATCAAGCCTCTAACCAATATGATGGTGTGAGTTTTTTTAATAAAGCTAATTTGAAAGGTGTTTCAAAAAAGCGTC
GCTTTGTGAATTAA

Upstream 100 bases:

>100_bases
AGATTGACCAAAGTATTTGTATTAAAGGGTATAGAATCAACTGCAGGTGCTAGGGCTATGATTGAAGCTACTGGTGGTAG
CTTCCAGGAGTAACATATAA

Downstream 100 bases:

>100_bases
CAAAATTTATATGCTTCCAACTTCCTATAATTTTTGGTAAAATACCTCCCATCTTCATCCATTATTGGATTCACTGGCGT
ATCTATATTTTTTGATCTAA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MSQPGLGNFGNRFAKSIELRNRLLFLLGALIVYRVGCYVPVPGVNPEAMLALMQKQGGGIVDMFNMFSGGALHRFSIFAL
NVMPYISASIVVQLATHIFPSLKAMQKEGESGRRKITQYSRIGAVILAVIQGGSIALALQNQTAPGGAAVVYAPGAAFVM
TAIVALTAGTVFLMWVGEQVTERGIGNGVSMIIFAGIVAGLPGSVLQTIDAFRSDALSLISLLIIVFIVLSFTFFVVFVE
RGLRRITVNYARRVEGRNSYMNKSSFLPLKLNMAGVIPPIFASSILAFPVTLSMWSGQASSNTLFGAWLQRVSSALGPGE
PLHMILFAVLIIGFAFFYTALVFSSQETADILKKSGALIPGIRPGKATSDYVDGVLTRLTAVGSLYLVIVCLLPEFMQSR
MGASFHFGGTSLLIAVVVVMDFISQIQVHQASNQYDGVSFFNKANLKGVSKKRRFVN

Sequences:

>Translated_457_residues
MSQPGLGNFGNRFAKSIELRNRLLFLLGALIVYRVGCYVPVPGVNPEAMLALMQKQGGGIVDMFNMFSGGALHRFSIFAL
NVMPYISASIVVQLATHIFPSLKAMQKEGESGRRKITQYSRIGAVILAVIQGGSIALALQNQTAPGGAAVVYAPGAAFVM
TAIVALTAGTVFLMWVGEQVTERGIGNGVSMIIFAGIVAGLPGSVLQTIDAFRSDALSLISLLIIVFIVLSFTFFVVFVE
RGLRRITVNYARRVEGRNSYMNKSSFLPLKLNMAGVIPPIFASSILAFPVTLSMWSGQASSNTLFGAWLQRVSSALGPGE
PLHMILFAVLIIGFAFFYTALVFSSQETADILKKSGALIPGIRPGKATSDYVDGVLTRLTAVGSLYLVIVCLLPEFMQSR
MGASFHFGGTSLLIAVVVVMDFISQIQVHQASNQYDGVSFFNKANLKGVSKKRRFVN
>Mature_456_residues
SQPGLGNFGNRFAKSIELRNRLLFLLGALIVYRVGCYVPVPGVNPEAMLALMQKQGGGIVDMFNMFSGGALHRFSIFALN
VMPYISASIVVQLATHIFPSLKAMQKEGESGRRKITQYSRIGAVILAVIQGGSIALALQNQTAPGGAAVVYAPGAAFVMT
AIVALTAGTVFLMWVGEQVTERGIGNGVSMIIFAGIVAGLPGSVLQTIDAFRSDALSLISLLIIVFIVLSFTFFVVFVER
GLRRITVNYARRVEGRNSYMNKSSFLPLKLNMAGVIPPIFASSILAFPVTLSMWSGQASSNTLFGAWLQRVSSALGPGEP
LHMILFAVLIIGFAFFYTALVFSSQETADILKKSGALIPGIRPGKATSDYVDGVLTRLTAVGSLYLVIVCLLPEFMQSRM
GASFHFGGTSLLIAVVVVMDFISQIQVHQASNQYDGVSFFNKANLKGVSKKRRFVN

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=450, Percent_Identity=55.3333333333333, Blast_Score=448, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 49135; Mature: 49004

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS00755 SECY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPGLGNFGNRFAKSIELRNRLLFLLGALIVYRVGCYVPVPGVNPEAMLALMQKQGGGI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCCCH
VDMFNMFSGGALHRFSIFALNVMPYISASIVVQLATHIFPSLKAMQKEGESGRRKITQYS
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RIGAVILAVIQGGSIALALQNQTAPGGAAVVYAPGAAFVMTAIVALTAGTVFLMWVGEQV
HHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
TERGIGNGVSMIIFAGIVAGLPGSVLQTIDAFRSDALSLISLLIIVFIVLSFTFFVVFVE
HHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGLRRITVNYARRVEGRNSYMNKSSFLPLKLNMAGVIPPIFASSILAFPVTLSMWSGQAS
HHHHHHHHHHHHHHCCCHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCC
SNTLFGAWLQRVSSALGPGEPLHMILFAVLIIGFAFFYTALVFSSQETADILKKSGALIP
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
GIRPGKATSDYVDGVLTRLTAVGSLYLVIVCLLPEFMQSRMGASFHFGGTSLLIAVVVVM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHH
DFISQIQVHQASNQYDGVSFFNKANLKGVSKKRRFVN
HHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
SQPGLGNFGNRFAKSIELRNRLLFLLGALIVYRVGCYVPVPGVNPEAMLALMQKQGGGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCCCH
VDMFNMFSGGALHRFSIFALNVMPYISASIVVQLATHIFPSLKAMQKEGESGRRKITQYS
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RIGAVILAVIQGGSIALALQNQTAPGGAAVVYAPGAAFVMTAIVALTAGTVFLMWVGEQV
HHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
TERGIGNGVSMIIFAGIVAGLPGSVLQTIDAFRSDALSLISLLIIVFIVLSFTFFVVFVE
HHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGLRRITVNYARRVEGRNSYMNKSSFLPLKLNMAGVIPPIFASSILAFPVTLSMWSGQAS
HHHHHHHHHHHHHHCCCHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCC
SNTLFGAWLQRVSSALGPGEPLHMILFAVLIIGFAFFYTALVFSSQETADILKKSGALIP
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
GIRPGKATSDYVDGVLTRLTAVGSLYLVIVCLLPEFMQSRMGASFHFGGTSLLIAVVVVM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHH
DFISQIQVHQASNQYDGVSFFNKANLKGVSKKRRFVN
HHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9322765; 10952301 [H]