Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680943
Identifier: 182680943
GI number: 182680943
Start: 472847
End: 473236
Strand: Reverse
Name: 182680943
Synonym: XfasM23_0381
Alternate gene names: NA
Gene position: 473236-472847 (Counterclockwise)
Preceding gene: 182680945
Following gene: 182680935
Centisome position: 18.66
GC content: 44.87
Gene sequence:
>390_bases ATGCCTACGAAAAAGAAAGATAGCTATGCCATAGCGGTTGGAGAGCGTTTAGCGGCTGCGCGTAAAGCTGTTGTACCGGC TATGACTCAAAGCAAGGCAGCAGAATTACTTAGTAAAAGTTTAGGTAAGCATATTACAGCTGCAACTATCTCCGGTTATG AAAGCGGACACCGCCTTCCTCATGTTTTTCTTGTAAACGCGCTATGTAGTATTTATGGCACTTTAACACCCGCCTACGTT TTCCACTTCGATAACGCGGCGGAAACGATGCAAGAGTCCAACCTATTGAAATATTTTCGCTCAGCAGATGCACGCGATAA AAGGAATATTACTAACCTAGCCTTGCACGCGCTGAATGGGTTGTACCCGAAATCGACCGATTCAGAATAA
Upstream 100 bases:
>100_bases ATAGCTTCAGCGTTATTACATACTCAGCAGCGCTTTGTAATATGTTGGCCGTTAAAGCGAGATGTGCACGTTATGCCGTT GTTCGCATACACTTCGCGCC
Downstream 100 bases:
>100_bases AGACGGAGAAAAGGGGCAATAAAACACTGCACGCGCTGCGTGGAATCGAGCAATCAGCCTATCTTATCAGTCGTCTGATA GAAGTCCAAAAAAGTCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MPTKKKDSYAIAVGERLAAARKAVVPAMTQSKAAELLSKSLGKHITAATISGYESGHRLPHVFLVNALCSIYGTLTPAYV FHFDNAAETMQESNLLKYFRSADARDKRNITNLALHALNGLYPKSTDSE
Sequences:
>Translated_129_residues MPTKKKDSYAIAVGERLAAARKAVVPAMTQSKAAELLSKSLGKHITAATISGYESGHRLPHVFLVNALCSIYGTLTPAYV FHFDNAAETMQESNLLKYFRSADARDKRNITNLALHALNGLYPKSTDSE >Mature_128_residues PTKKKDSYAIAVGERLAAARKAVVPAMTQSKAAELLSKSLGKHITAATISGYESGHRLPHVFLVNALCSIYGTLTPAYVF HFDNAAETMQESNLLKYFRSADARDKRNITNLALHALNGLYPKSTDSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14069; Mature: 13938
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTKKKDSYAIAVGERLAAARKAVVPAMTQSKAAELLSKSLGKHITAATISGYESGHRLP CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCH HVFLVNALCSIYGTLTPAYVFHFDNAAETMQESNLLKYFRSADARDKRNITNLALHALNG HHHHHHHHHHHHHHHCHHHEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC LYPKSTDSE CCCCCCCCC >Mature Secondary Structure PTKKKDSYAIAVGERLAAARKAVVPAMTQSKAAELLSKSLGKHITAATISGYESGHRLP CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCH HVFLVNALCSIYGTLTPAYVFHFDNAAETMQESNLLKYFRSADARDKRNITNLALHALNG HHHHHHHHHHHHHHHCHHHEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC LYPKSTDSE CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA