Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182680903
Identifier: 182680903
GI number: 182680903
Start: 440367
End: 440585
Strand: Direct
Name: 182680903
Synonym: XfasM23_0341
Alternate gene names: NA
Gene position: 440367-440585 (Clockwise)
Preceding gene: 182680901
Following gene: 182680904
Centisome position: 17.37
GC content: 47.49
Gene sequence:
>219_bases GTGATGTCAGGTTCAGGCCTATCAGAGTTCCAAAATTTTATTGGTGAAAAACGTATGTTTTCTGTCTGCTCTGCTCCAGA GGATTCCCAGGAGATAGCGAAAAACGCAACTGCCGATCTGAAGCAACGATCTAATCTTGAAGAGGTTGGCGGGCGTGGTG GATTGGATCCGGTGCGTTATGGGGATTGGGAGAAAGATGGGCGCTGTATTGATTTCTGA
Upstream 100 bases:
>100_bases GCGGATCGGTATTTTAGATGTCGTGAATCGCGGAAAGTTGGTTCTTGAGTTTTATCCATTTCCGGATACAAAAAGCTTCA GTGCATTCTTGTGATGATTT
Downstream 100 bases:
>100_bases TTGCAGTTTCAGTCAACGCGGCCAATGTGCTGCTCAGCCGGGATAACGAGTTCTACCATGGCGACCCGAGAACGCCCTCT TTCACCTCATTTGCAGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MMSGSGLSEFQNFIGEKRMFSVCSAPEDSQEIAKNATADLKQRSNLEEVGGRGGLDPVRYGDWEKDGRCIDF
Sequences:
>Translated_72_residues MMSGSGLSEFQNFIGEKRMFSVCSAPEDSQEIAKNATADLKQRSNLEEVGGRGGLDPVRYGDWEKDGRCIDF >Mature_72_residues MMSGSGLSEFQNFIGEKRMFSVCSAPEDSQEIAKNATADLKQRSNLEEVGGRGGLDPVRYGDWEKDGRCIDF
Specific function: Unknown
COG id: COG5508
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7963; Mature: 7963
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSGSGLSEFQNFIGEKRMFSVCSAPEDSQEIAKNATADLKQRSNLEEVGGRGGLDPVRY CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC GDWEKDGRCIDF CCCCCCCCEECC >Mature Secondary Structure MMSGSGLSEFQNFIGEKRMFSVCSAPEDSQEIAKNATADLKQRSNLEEVGGRGGLDPVRY CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC GDWEKDGRCIDF CCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA