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The map label for this gene is 182680800

Identifier: 182680800

GI number: 182680800

Start: 309642

End: 310700

Strand: Reverse

Name: 182680800

Synonym: XfasM23_0230

Alternate gene names: NA

Gene position: 310700-309642 (Counterclockwise)

Preceding gene: 182680801

Following gene: 182680799

Centisome position: 12.25

GC content: 59.21

Gene sequence:

>1059_bases
ATGAGCACACTCAAAATCAGCGAAGCCGGGACCGTGCAGTTCCCCATGGTGAAACACGCGGTGGAGATCGGCTGGACATC
AATCACGCCGGAGGATGCGCGCACCAAGCGCGGCGGCGAAGCCGGTACCTTCTTCCGTGACGTGCTGGAAGCCAAGCTCG
CAGCGTTCAACCCCTGGATGTCTGCCGACACCATGCGCTCCGTGGTGGAAACCTTGGACGCACTGCCGGCCACCATTGAA
GGCAACCGCAAGTTGCTGGCCTGGCTGCGCGGCGAACATCAGTGGTACGACGCCTCCGCAAAGCGCCACCGACCGGTGAC
ACTCATCGACTTCACACACGTGGCGGACAACCTGTTTCATGTGACCTGGGAATGGAAGATCAAACCACCCGCACGCAAGG
GCAACCGCGCCGATGTCATGTTCCTCATCAACGGCGTACCGGTGATGATCGTCGAACACAAAAACCCGAAGGACGGCGAC
GCCATTGAGCGTGCCATCAAGCAACTGCGTCGCTACACGCTGGAAACACCCGAGCTGCTGGCGACAGCCCAGCTATTCAA
CGTCACGCACCTACTCGACTACTGGTACGGCGTCACCTGGAATGCGAACCGGCGCTCTATGGCACGCTGGAAACAGGCAC
CAGAAGAAACCTACCGCTTCGCAGTACAGTCCTTCTTCCAACCCACCGAATTCCTGCGCACGTTGCAGCACTGGATTTTG
TTCTACGTAGAGGACGGCAAGATGCGCAAGTCGGTGCTGCACCAGCACCAGCGGCGCGCCATCGACGTGATTCTGGAACG
CTGCGCAGACCCTGCCAAGACACGCGGCCTAATCTGGCACACCCAGGGCTTGGGCAAGACCTTCACTCTGCTGACCGCTG
CACGGTTGATCTTGGAAAACAAGGCACGCTTCGCCAATGCAACGGTGATTCTCGTTGTAGACCGCACGGAGCTGGAAGGC
CAGTTGAAAGGATGGGTGGAATGCCTGCTGGGCGAGATGCAGCAGCAAGACATCACGGTCAAACGGGCCAACAATAAGGC
CAAACTGCAGTCCCTGTGA

Upstream 100 bases:

>100_bases
AATCCCTGCTCCACAAACTGATGACCGGGGAAATTTCTGTATCGGATCTGGATCTGTCGGCACTGTCCCCAGCCTCGACG
CAACACGAGGGGATCACCGC

Downstream 100 bases:

>100_bases
GATGCTGACTTTCGCGGCCTGATCATCTCAATGATCCACAAGTTCGAGGCCGTCCGCAAAGACAGGTGCCTGCGCGACAA
CGTGTACGTGTTTATTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MSTLKISEAGTVQFPMVKHAVEIGWTSITPEDARTKRGGEAGTFFRDVLEAKLAAFNPWMSADTMRSVVETLDALPATIE
GNRKLLAWLRGEHQWYDASAKRHRPVTLIDFTHVADNLFHVTWEWKIKPPARKGNRADVMFLINGVPVMIVEHKNPKDGD
AIERAIKQLRRYTLETPELLATAQLFNVTHLLDYWYGVTWNANRRSMARWKQAPEETYRFAVQSFFQPTEFLRTLQHWIL
FYVEDGKMRKSVLHQHQRRAIDVILERCADPAKTRGLIWHTQGLGKTFTLLTAARLILENKARFANATVILVVDRTELEG
QLKGWVECLLGEMQQQDITVKRANNKAKLQSL

Sequences:

>Translated_352_residues
MSTLKISEAGTVQFPMVKHAVEIGWTSITPEDARTKRGGEAGTFFRDVLEAKLAAFNPWMSADTMRSVVETLDALPATIE
GNRKLLAWLRGEHQWYDASAKRHRPVTLIDFTHVADNLFHVTWEWKIKPPARKGNRADVMFLINGVPVMIVEHKNPKDGD
AIERAIKQLRRYTLETPELLATAQLFNVTHLLDYWYGVTWNANRRSMARWKQAPEETYRFAVQSFFQPTEFLRTLQHWIL
FYVEDGKMRKSVLHQHQRRAIDVILERCADPAKTRGLIWHTQGLGKTFTLLTAARLILENKARFANATVILVVDRTELEG
QLKGWVECLLGEMQQQDITVKRANNKAKLQSL
>Mature_351_residues
STLKISEAGTVQFPMVKHAVEIGWTSITPEDARTKRGGEAGTFFRDVLEAKLAAFNPWMSADTMRSVVETLDALPATIEG
NRKLLAWLRGEHQWYDASAKRHRPVTLIDFTHVADNLFHVTWEWKIKPPARKGNRADVMFLINGVPVMIVEHKNPKDGDA
IERAIKQLRRYTLETPELLATAQLFNVTHLLDYWYGVTWNANRRSMARWKQAPEETYRFAVQSFFQPTEFLRTLQHWILF
YVEDGKMRKSVLHQHQRRAIDVILERCADPAKTRGLIWHTQGLGKTFTLLTAARLILENKARFANATVILVVDRTELEGQ
LKGWVECLLGEMQQQDITVKRANNKAKLQSL

Specific function: Subunit R is required for both nuclease and ATPase activities, but not for modification [H]

COG id: COG0610

COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR021810
- InterPro:   IPR014021
- InterPro:   IPR004473
- InterPro:   IPR006935
- InterPro:   IPR007409 [H]

Pfam domain/function: PF11867 DUF3387; PF04313 HSDR_N; PF04851 ResIII [H]

EC number: =3.1.21.3 [H]

Molecular weight: Translated: 40501; Mature: 40370

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLKISEAGTVQFPMVKHAVEIGWTSITPEDARTKRGGEAGTFFRDVLEAKLAAFNPWM
CCCEEECCCCCEECHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
SADTMRSVVETLDALPATIEGNRKLLAWLRGEHQWYDASAKRHRPVTLIDFTHVADNLFH
CHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCEECCCCCCCCCEEEEEHHHHHCCEEE
VTWEWKIKPPARKGNRADVMFLINGVPVMIVEHKNPKDGDAIERAIKQLRRYTLETPELL
EEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHH
ATAQLFNVTHLLDYWYGVTWNANRRSMARWKQAPEETYRFAVQSFFQPTEFLRTLQHWIL
HHHHHHHHHHHHHHHHCCEECCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHEE
FYVEDGKMRKSVLHQHQRRAIDVILERCADPAKTRGLIWHTQGLGKTFTLLTAARLILEN
EEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCHHHHHHHHHHHHHHC
KARFANATVILVVDRTELEGQLKGWVECLLGEMQQQDITVKRANNKAKLQSL
CCHHCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHCCCC
>Mature Secondary Structure 
STLKISEAGTVQFPMVKHAVEIGWTSITPEDARTKRGGEAGTFFRDVLEAKLAAFNPWM
CCEEECCCCCEECHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
SADTMRSVVETLDALPATIEGNRKLLAWLRGEHQWYDASAKRHRPVTLIDFTHVADNLFH
CHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCEECCCCCCCCCEEEEEHHHHHCCEEE
VTWEWKIKPPARKGNRADVMFLINGVPVMIVEHKNPKDGDAIERAIKQLRRYTLETPELL
EEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHH
ATAQLFNVTHLLDYWYGVTWNANRRSMARWKQAPEETYRFAVQSFFQPTEFLRTLQHWIL
HHHHHHHHHHHHHHHHCCEECCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHEE
FYVEDGKMRKSVLHQHQRRAIDVILERCADPAKTRGLIWHTQGLGKTFTLLTAARLILEN
EEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCHHHHHHHHHHHHHHC
KARFANATVILVVDRTELEGQLKGWVECLLGEMQQQDITVKRANNKAKLQSL
CCHHCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]