Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680796
Identifier: 182680796
GI number: 182680796
Start: 303282
End: 303509
Strand: Direct
Name: 182680796
Synonym: XfasM23_0225
Alternate gene names: NA
Gene position: 303282-303509 (Clockwise)
Preceding gene: 182680794
Following gene: 182680797
Centisome position: 11.96
GC content: 56.58
Gene sequence:
>228_bases ATGGATGCGACTGTTGCCGAACGTGGGCAAATTACGCTGCCTAAGAGAGTGCGCGATGCACTGGGTTTGACCAAGGGCAC CGTGTTGAAGGTCGAATTGGAGGGGGGACGTATCATCCTGCGTAAGAGTGTGGATGATGCAATCGCGCGTGCCCGCGGCA GATTTATCCTGGACGATCTGGACGATTTCGGTTGCAGCGCCACCGCGACGAAGACGGACAAGCAATGA
Upstream 100 bases:
>100_bases TATGCTCACGTATGACCCGGAATACTTAGATGTCTGCATGCATTCTGGTATGTCAAAAAAAATATGTATAATGACCGCAT ACTCATAGAGGCAATCATCA
Downstream 100 bases:
>100_bases GACAGTGATTGCAGTCGATTTCCCCGTTCTGGTTGAATTGCTCACTGATCGGCCACAGGCTGATGCAGTTGAGGCTGCGT TGCGCCAATGTCTAGTCAGT
Product: AbrB family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MDATVAERGQITLPKRVRDALGLTKGTVLKVELEGGRIILRKSVDDAIARARGRFILDDLDDFGCSATATKTDKQ
Sequences:
>Translated_75_residues MDATVAERGQITLPKRVRDALGLTKGTVLKVELEGGRIILRKSVDDAIARARGRFILDDLDDFGCSATATKTDKQ >Mature_75_residues MDATVAERGQITLPKRVRDALGLTKGTVLKVELEGGRIILRKSVDDAIARARGRFILDDLDDFGCSATATKTDKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8158; Mature: 8158
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDATVAERGQITLPKRVRDALGLTKGTVLKVELEGGRIILRKSVDDAIARARGRFILDDL CCCCCCCCCCEECCHHHHHHHCCCCCCEEEEEECCCEEEEEECHHHHHHHHCCCEEEECC DDFGCSATATKTDKQ CCCCCCCCCCCCCCC >Mature Secondary Structure MDATVAERGQITLPKRVRDALGLTKGTVLKVELEGGRIILRKSVDDAIARARGRFILDDL CCCCCCCCCCEECCHHHHHHHCCCCCCEEEEEECCCEEEEEECHHHHHHHHCCCEEEECC DDFGCSATATKTDKQ CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA