Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680788
Identifier: 182680788
GI number: 182680788
Start: 292293
End: 292673
Strand: Reverse
Name: 182680788
Synonym: XfasM23_0217
Alternate gene names: NA
Gene position: 292673-292293 (Counterclockwise)
Preceding gene: 182680789
Following gene: 182680787
Centisome position: 11.54
GC content: 49.08
Gene sequence:
>381_bases ATGAGCTTCCGTACACTATGCCACCGTGTGGAACGTGCCGAGCGCTTAGTAGAAGAACGCAGTAAACAAACCTGCAACCA TTGGCAAGAACTCCAACACAGCTGGCAAGCAACGTGGACACCGCTACGCATCGTGATAACTGGGCTTGGATTGGGATTCA TTGCAGGACGCGTAAAGCCCAGCATTACTTTAAAAACGTTCACTGATAAATTCGGCAGTGCTAAGCACTTGATACAGATA CTCGGTGCCATGTCGACATTTTTTACGACGACATGCGCACACAATGCCTCTAAACAGAACAAGCCCAGCACCGAGGAAAG CCACACAACCACCACATCACAACCTACAGCAGACATAATCAACCTATCCGAACACGCCTGA
Upstream 100 bases:
>100_bases TACGCCACACTGGATTACACGCAACACGACGCCAATTGCTGCGCCTCGCCCTGCTGCACGGAACAGACGAAAGCCAGCTC ACAACCGAGAAGGATCGCTC
Downstream 100 bases:
>100_bases ACCCGCTACATGTAGGCCGGTGCTTGGACGCACTCAGTCACCGATCATTCCCCTTTCTGATTCTGTCCACCCCATGACCG ATCAGCCGACACACAACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSFRTLCHRVERAERLVEERSKQTCNHWQELQHSWQATWTPLRIVITGLGLGFIAGRVKPSITLKTFTDKFGSAKHLIQI LGAMSTFFTTTCAHNASKQNKPSTEESHTTTTSQPTADIINLSEHA
Sequences:
>Translated_126_residues MSFRTLCHRVERAERLVEERSKQTCNHWQELQHSWQATWTPLRIVITGLGLGFIAGRVKPSITLKTFTDKFGSAKHLIQI LGAMSTFFTTTCAHNASKQNKPSTEESHTTTTSQPTADIINLSEHA >Mature_125_residues SFRTLCHRVERAERLVEERSKQTCNHWQELQHSWQATWTPLRIVITGLGLGFIAGRVKPSITLKTFTDKFGSAKHLIQIL GAMSTFFTTTCAHNASKQNKPSTEESHTTTTSQPTADIINLSEHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14180; Mature: 14049
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFRTLCHRVERAERLVEERSKQTCNHWQELQHSWQATWTPLRIVITGLGLGFIAGRVKP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC SITLKTFTDKFGSAKHLIQILGAMSTFFTTTCAHNASKQNKPSTEESHTTTTSQPTADII CEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH NLSEHA CCCCCC >Mature Secondary Structure SFRTLCHRVERAERLVEERSKQTCNHWQELQHSWQATWTPLRIVITGLGLGFIAGRVKP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC SITLKTFTDKFGSAKHLIQILGAMSTFFTTTCAHNASKQNKPSTEESHTTTTSQPTADII CEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH NLSEHA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA