Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182680785
Identifier: 182680785
GI number: 182680785
Start: 289458
End: 289628
Strand: Direct
Name: 182680785
Synonym: XfasM23_0214
Alternate gene names: NA
Gene position: 289458-289628 (Clockwise)
Preceding gene: 182680784
Following gene: 182680794
Centisome position: 11.42
GC content: 54.97
Gene sequence:
>171_bases ATGTCGGCGTTGGTCGGTGTCAGCCAGCAGCAAATACGTACGCTGTGTATCGGGGATTGCGGTGCCAGTGTGTTATGGGC GGTGGCGGGTTGCAGTCGTATTTTGATGAACGAACGATGGCTAGCATCGTTCGGTGCTGTCTGGCTGGGTCCTTTGGTTG CTTATCTGTAG
Upstream 100 bases:
>100_bases GGTTTCTGGGGTGGCTGGTAAGGCATCGTTGGTGAATCGGTAGCCGCATTGCAGTGCATAGCAGTCATGCAGCTGCTAAG ACAGTGTATGAAGAGCAGCC
Downstream 100 bases:
>100_bases CGTTCTTTCAGCATCGCCCAAGCCGAGCGTAGTCCCAGTGCCTCGCCACCTGCTGGGCGCCCGGGGCGATTGAGGTCGTT CCATGCGTAAACATCAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MSALVGVSQQQIRTLCIGDCGASVLWAVAGCSRILMNERWLASFGAVWLGPLVAYL
Sequences:
>Translated_56_residues MSALVGVSQQQIRTLCIGDCGASVLWAVAGCSRILMNERWLASFGAVWLGPLVAYL >Mature_55_residues SALVGVSQQQIRTLCIGDCGASVLWAVAGCSRILMNERWLASFGAVWLGPLVAYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5983; Mature: 5852
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALVGVSQQQIRTLCIGDCGASVLWAVAGCSRILMNERWLASFGAVWLGPLVAYL CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SALVGVSQQQIRTLCIGDCGASVLWAVAGCSRILMNERWLASFGAVWLGPLVAYL CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA