Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680699
Identifier: 182680699
GI number: 182680699
Start: 178538
End: 180445
Strand: Direct
Name: 182680699
Synonym: XfasM23_0128
Alternate gene names: NA
Gene position: 178538-180445 (Clockwise)
Preceding gene: 182680697
Following gene: 182680701
Centisome position: 7.04
GC content: 43.66
Gene sequence:
>1908_bases ATGTCCTCTTTGCTCATTCGTTTGCTCACGCTATTTATTGTCACTACACTGAATTTATTTTTGTGTTTGCCAGCTAAAGC TGCTACTCACAAGAGTAGCGAACTTCAAACCATGCAAACTCATAGTAAATCTAAGAACCCAATGTCTGTGTTACTTGGTA AGGCAGAACAGTTAAACCTGCTATATGACAAGTACTGGGATGATTCAATGAGACTCAATCCTCTACAGGCTACATTGCAA GGAGATGCTTATCATGGAGATAGAATGCCCAATTTCCTGTCGGCTGAGTTCCGGAAGCAGCATCACGATTTCATCGAGAA ATGGTTGAAGAAGGTTGAGATGGTCGGGGCGGATGGACTAGATGGACAGGCATTTATCAGCTACCAGATCTTCGTGCGTG ATGCACGTAACTCGTTGCATGCCGAGCGTTATCCGAACTGGATGTTGCCAATTAATCAGTTTTACAACATCGCTAATGTG GCAGTAGTTCTTGGCTCTGGTAATGGTGCGCAACCATTCAATACCGTGCAGGATTATGACAACTGGGCACATCGCTCACT AGGCATTCCTGCGTTGTTCAATCAAGCCATTGTGAATATGCGTCTAGGTATGAAATCTGGTGTAGTTCAGCCGAAAGTGT TAATGGAAAAGGTTATTCCGCAGTTGGATTCTATTATCAAGCCAACTGCGGAAGAAACGTTGTTCTGGGTGCCCATCCGT AATATGTCTGTCACCTTTTCAAAGGAGAACCGGCAACGTATTACTGCTGAATATAAAAGTATTATTGAGTATCGGTTGCT ACCTGCTTACAGAGCACTACGTAATTTTATTGCCACTGAATATCTTCCAGTGTGTCGTGATAGTGTTGGCTTGAGTGCAT TACCTGGTGGTGCGTCTTGGTATGCATATACAGTGCGTCAAAGCACTACGACCAACATGACCCCAGAACAGATTCATCAG CTTGGCTTGAAAGAAGTAGAGCGATTACAGGCTGAAATTCAGTCAGTGATGCGTCAGCTCAATTTCAATGGTTCTATGCA GAAGTTCTTCAGTTTCATGCAGAATAATGAGTATTTTACCTTTGGTAGTGAGAAAGAGATGCTTGCTTATTACCGTGATC TCAGAACACGTGTGGAGGCACGGGTGCCAGCTTTATTTTCGCTCGTGCCAAAAGCTGGTTTTGAAATTCTTCCGGTAGAA TCATTCCGTGCACCTTCAGCAGCAGCTGGTTCGTATATGCCCCCGTCTAGTAATAGACGCCATAACGGTGTGTTCTACGC TAATACTAATGATTTGTCTTCCCGTCGTACTTGGAATGCAGAAAAGCTTTTTCTGCATCAAGGAATTCCTGGATATCATT TTCAGTTAGGATTGCAACAGGAATTGCGTAATCTCCCTAAGTTCCGTCGATTAGGTGGTGAGACTGCATTCATTGAAGGA TGGGGTTTATATGCTGAATCTCTTGGTAAGGAACTCGGACTTTACCAAGATGCATACAACTATTTCGGTTACTTGCAAGA TGCGCTATCAAGGGCAATTCGTTTAGTAGTCGACACCGGTTTACATACTAAAGGCTGGACTCGTGCACAAGTAGTTGACT ATATTGTAGAGAATTCGGCAACCAGTCCTATAGAGGCTGAAGCCGAAGTTGATCGTTATATCGCTATCCCAGGTCAAGCA TTAGCCTATAAGGTTGGCGAATTAAAAATCCACCAATTGCGCCAGTATGCACAACTGACATTAGGCCCAATGTTCGATCT ACGGGAGTTCCATGCGGAAATACTGAAAGATGGTTCAGTACCGCTGGACATTCTGCAACAAAAAATCGAACGTTGGATTG CTGTAAAACGTGTCAATATGCGATCAATATCACATCAAAAGTCACGGGATCAGCGCCGTAAATCGTAG
Upstream 100 bases:
>100_bases ATATCCTGAGCGCAACATAACTGGGCCGCAGTACATTTTGACTATAGATGATGTTGAATCGGGCAATCTCCCCTGATCGT AATGTTTTCTGAAATTTTCG
Downstream 100 bases:
>100_bases TCTTACATTACATTGATTGTTATGGAGCTTCGTTATCACTCTATGAAATCAGCCAGGATTGATTTGATAAGCGTATTTAC TCATATCTATGCGCTAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 635; Mature: 634
Protein sequence:
>635_residues MSSLLIRLLTLFIVTTLNLFLCLPAKAATHKSSELQTMQTHSKSKNPMSVLLGKAEQLNLLYDKYWDDSMRLNPLQATLQ GDAYHGDRMPNFLSAEFRKQHHDFIEKWLKKVEMVGADGLDGQAFISYQIFVRDARNSLHAERYPNWMLPINQFYNIANV AVVLGSGNGAQPFNTVQDYDNWAHRSLGIPALFNQAIVNMRLGMKSGVVQPKVLMEKVIPQLDSIIKPTAEETLFWVPIR NMSVTFSKENRQRITAEYKSIIEYRLLPAYRALRNFIATEYLPVCRDSVGLSALPGGASWYAYTVRQSTTTNMTPEQIHQ LGLKEVERLQAEIQSVMRQLNFNGSMQKFFSFMQNNEYFTFGSEKEMLAYYRDLRTRVEARVPALFSLVPKAGFEILPVE SFRAPSAAAGSYMPPSSNRRHNGVFYANTNDLSSRRTWNAEKLFLHQGIPGYHFQLGLQQELRNLPKFRRLGGETAFIEG WGLYAESLGKELGLYQDAYNYFGYLQDALSRAIRLVVDTGLHTKGWTRAQVVDYIVENSATSPIEAEAEVDRYIAIPGQA LAYKVGELKIHQLRQYAQLTLGPMFDLREFHAEILKDGSVPLDILQQKIERWIAVKRVNMRSISHQKSRDQRRKS
Sequences:
>Translated_635_residues MSSLLIRLLTLFIVTTLNLFLCLPAKAATHKSSELQTMQTHSKSKNPMSVLLGKAEQLNLLYDKYWDDSMRLNPLQATLQ GDAYHGDRMPNFLSAEFRKQHHDFIEKWLKKVEMVGADGLDGQAFISYQIFVRDARNSLHAERYPNWMLPINQFYNIANV AVVLGSGNGAQPFNTVQDYDNWAHRSLGIPALFNQAIVNMRLGMKSGVVQPKVLMEKVIPQLDSIIKPTAEETLFWVPIR NMSVTFSKENRQRITAEYKSIIEYRLLPAYRALRNFIATEYLPVCRDSVGLSALPGGASWYAYTVRQSTTTNMTPEQIHQ LGLKEVERLQAEIQSVMRQLNFNGSMQKFFSFMQNNEYFTFGSEKEMLAYYRDLRTRVEARVPALFSLVPKAGFEILPVE SFRAPSAAAGSYMPPSSNRRHNGVFYANTNDLSSRRTWNAEKLFLHQGIPGYHFQLGLQQELRNLPKFRRLGGETAFIEG WGLYAESLGKELGLYQDAYNYFGYLQDALSRAIRLVVDTGLHTKGWTRAQVVDYIVENSATSPIEAEAEVDRYIAIPGQA LAYKVGELKIHQLRQYAQLTLGPMFDLREFHAEILKDGSVPLDILQQKIERWIAVKRVNMRSISHQKSRDQRRKS >Mature_634_residues SSLLIRLLTLFIVTTLNLFLCLPAKAATHKSSELQTMQTHSKSKNPMSVLLGKAEQLNLLYDKYWDDSMRLNPLQATLQG DAYHGDRMPNFLSAEFRKQHHDFIEKWLKKVEMVGADGLDGQAFISYQIFVRDARNSLHAERYPNWMLPINQFYNIANVA VVLGSGNGAQPFNTVQDYDNWAHRSLGIPALFNQAIVNMRLGMKSGVVQPKVLMEKVIPQLDSIIKPTAEETLFWVPIRN MSVTFSKENRQRITAEYKSIIEYRLLPAYRALRNFIATEYLPVCRDSVGLSALPGGASWYAYTVRQSTTTNMTPEQIHQL GLKEVERLQAEIQSVMRQLNFNGSMQKFFSFMQNNEYFTFGSEKEMLAYYRDLRTRVEARVPALFSLVPKAGFEILPVES FRAPSAAAGSYMPPSSNRRHNGVFYANTNDLSSRRTWNAEKLFLHQGIPGYHFQLGLQQELRNLPKFRRLGGETAFIEGW GLYAESLGKELGLYQDAYNYFGYLQDALSRAIRLVVDTGLHTKGWTRAQVVDYIVENSATSPIEAEAEVDRYIAIPGQAL AYKVGELKIHQLRQYAQLTLGPMFDLREFHAEILKDGSVPLDILQQKIERWIAVKRVNMRSISHQKSRDQRRKS
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72625; Mature: 72494
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLLIRLLTLFIVTTLNLFLCLPAKAATHKSSELQTMQTHSKSKNPMSVLLGKAEQLNL CHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCCCCCHHHHHCCHHHHHH LYDKYWDDSMRLNPLQATLQGDAYHGDRMPNFLSAEFRKQHHDFIEKWLKKVEMVGADGL HHHHHCCCCCCCCHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DGQAFISYQIFVRDARNSLHAERYPNWMLPINQFYNIANVAVVLGSGNGAQPFNTVQDYD CCCEEEEEEEEEEHHHHHHHHHHCCCCCCCHHHHHCCEEEEEEEECCCCCCCCHHHHHHH NWAHRSLGIPALFNQAIVNMRLGMKSGVVQPKVLMEKVIPQLDSIIKPTAEETLFWVPIR HHHHHCCCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEEEEC NMSVTFSKENRQRITAEYKSIIEYRLLPAYRALRNFIATEYLPVCRDSVGLSALPGGASW CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE YAYTVRQSTTTNMTPEQIHQLGLKEVERLQAEIQSVMRQLNFNGSMQKFFSFMQNNEYFT EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEE FGSEKEMLAYYRDLRTRVEARVPALFSLVPKAGFEILPVESFRAPSAAAGSYMPPSSNRR ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCC HNGVFYANTNDLSSRRTWNAEKLFLHQGIPGYHFQLGLQQELRNLPKFRRLGGETAFIEG CCCEEEECCCCCCCCCCCCHHHHHEECCCCCCEEEECHHHHHHCCHHHHHCCCCEEEEEC WGLYAESLGKELGLYQDAYNYFGYLQDALSRAIRLVVDTGLHTKGWTRAQVVDYIVENSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC TSPIEAEAEVDRYIAIPGQALAYKVGELKIHQLRQYAQLTLGPMFDLREFHAEILKDGSV CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC PLDILQQKIERWIAVKRVNMRSISHQKSRDQRRKS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSLLIRLLTLFIVTTLNLFLCLPAKAATHKSSELQTMQTHSKSKNPMSVLLGKAEQLNL HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCCCCCHHHHHCCHHHHHH LYDKYWDDSMRLNPLQATLQGDAYHGDRMPNFLSAEFRKQHHDFIEKWLKKVEMVGADGL HHHHHCCCCCCCCHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DGQAFISYQIFVRDARNSLHAERYPNWMLPINQFYNIANVAVVLGSGNGAQPFNTVQDYD CCCEEEEEEEEEEHHHHHHHHHHCCCCCCCHHHHHCCEEEEEEEECCCCCCCCHHHHHHH NWAHRSLGIPALFNQAIVNMRLGMKSGVVQPKVLMEKVIPQLDSIIKPTAEETLFWVPIR HHHHHCCCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEEEEC NMSVTFSKENRQRITAEYKSIIEYRLLPAYRALRNFIATEYLPVCRDSVGLSALPGGASW CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE YAYTVRQSTTTNMTPEQIHQLGLKEVERLQAEIQSVMRQLNFNGSMQKFFSFMQNNEYFT EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEE FGSEKEMLAYYRDLRTRVEARVPALFSLVPKAGFEILPVESFRAPSAAAGSYMPPSSNRR ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCC HNGVFYANTNDLSSRRTWNAEKLFLHQGIPGYHFQLGLQQELRNLPKFRRLGGETAFIEG CCCEEEECCCCCCCCCCCCHHHHHEECCCCCCEEEECHHHHHHCCHHHHHCCCCEEEEEC WGLYAESLGKELGLYQDAYNYFGYLQDALSRAIRLVVDTGLHTKGWTRAQVVDYIVENSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC TSPIEAEAEVDRYIAIPGQALAYKVGELKIHQLRQYAQLTLGPMFDLREFHAEILKDGSV CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC PLDILQQKIERWIAVKRVNMRSISHQKSRDQRRKS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA