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The map label for this gene is recA

Identifier: 182680657

GI number: 182680657

Start: 117669

End: 118712

Strand: Direct

Name: recA

Synonym: XfasM23_0086

Alternate gene names: 182680657

Gene position: 117669-118712 (Clockwise)

Preceding gene: 182680656

Following gene: 182680658

Centisome position: 4.64

GC content: 51.25

Gene sequence:

>1044_bases
ATGGATGAGAACAAGAAACGCGCCCTTTCTGTCGCTTTAAGCCAGATTGAAAAACAGTTCGGCAAGGGGTCCGTGATGCG
GATGGGCGATCGCGTGATCGAAGCCGTAGAGGCGATCCCGACAGGTTCGCTCATGTTGGATCTGGCCCTGGGGATAGGTG
GTTTGCCAAAGGGACGTGTCGTGGAAATCTATGGGCCGGAATCTTCTGGGAAGACCACATTGACTTTGCAGGCGATCGCT
CAATGCCAGAAGAGGGGAGGTACAGCAGCGTTCATTGATGCTGAGCATGCCTTGGATCCGATTTATGCGGGCAAGTTAGG
CGTCAATGTTGATGATTTGTTGTTGTCTCAGCCAGATACTGGGGAGCAGGCTCTGGAAATCGCTGACATGCTGGTGCGCT
CGGGGTCGATCGATATCATGGTTATTGATTCGGTTGCGGCACTCACGCCAAGGGCGGAGATTGAGGGTGAGATGGGAGAT
CAGTTGCCCGGTCTTCAGGCGCGATTGATGAGCCAGGCGCTGCGTAAATTGACCGGCAATATCAAGCGCTCTAATACGCT
GGTGATTTTTATCAACCAGTTGCGTATGAAAATTGGGATCATGATGCCGGGTCAAAGCCCTGAAACTACGACAGGGGGTA
ATGCGCTGAAGTTCTATGCTTCTGTGCGTTTGGATATTCGCCGTATTGGCGCGATCAAGAAAGGTGACGAAATTATCGGG
AATCAAACCAAAATCAAGGTTGTTAAAAACAAGTTGGCGCCTCCCTTCAAACAAGTCGTGACTGAGATTCTCTATGGTGA
AGGCATCAGTCGTGAAGGGGAATTGATTGAAATGGGCGTGGAGGCCAAGTTGGTTGAGAAAGCCGGCGCTTGGTATAGCT
ATGGTGGTGAGCGGATCGGGCAAGGAAAAGATAATGCGCGTGGCTATCTACGCGAAAACCCGCATTTTGCGGCCAAGCTT
GAGGCTGATTTGCGTGAGAAATTTGAGCCGACCGAGCTTTCTCGAGAAGAGGGCGATGAAGATACGCTCGAAGATGCAAT
GTAA

Upstream 100 bases:

>100_bases
TTTAAGCTGATGAGGCCATCAATTTTTCATCATACGTAATGCGTGATCGTTGGACCTTCCACATCATGTTTCTATTAATA
CTAATAAGAGGATCGCTTGG

Downstream 100 bases:

>100_bases
TCATTGCCGATGACAGAGCGAGTTGTGTTGCTGTTTCTCGTGGTGATGCTCCGATGTCAGTGCAAGATGCGACGGCGCGG
AGCATGACGGACGCATTCGT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MDENKKRALSVALSQIEKQFGKGSVMRMGDRVIEAVEAIPTGSLMLDLALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
QCQKRGGTAAFIDAEHALDPIYAGKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSIDIMVIDSVAALTPRAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVIFINQLRMKIGIMMPGQSPETTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIEMGVEAKLVEKAGAWYSYGGERIGQGKDNARGYLRENPHFAAKL
EADLREKFEPTELSREEGDEDTLEDAM

Sequences:

>Translated_347_residues
MDENKKRALSVALSQIEKQFGKGSVMRMGDRVIEAVEAIPTGSLMLDLALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
QCQKRGGTAAFIDAEHALDPIYAGKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSIDIMVIDSVAALTPRAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVIFINQLRMKIGIMMPGQSPETTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIEMGVEAKLVEKAGAWYSYGGERIGQGKDNARGYLRENPHFAAKL
EADLREKFEPTELSREEGDEDTLEDAM
>Mature_347_residues
MDENKKRALSVALSQIEKQFGKGSVMRMGDRVIEAVEAIPTGSLMLDLALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
QCQKRGGTAAFIDAEHALDPIYAGKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSIDIMVIDSVAALTPRAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVIFINQLRMKIGIMMPGQSPETTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIEMGVEAKLVEKAGAWYSYGGERIGQGKDNARGYLRENPHFAAKL
EADLREKFEPTELSREEGDEDTLEDAM

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=326, Percent_Identity=69.0184049079755, Blast_Score=468, Evalue=1e-133,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_XYLF2 (B2I680)

Other databases:

- EMBL:   CP001011
- RefSeq:   YP_001828817.1
- ProteinModelPortal:   B2I680
- SMR:   B2I680
- GeneID:   6202853
- GenomeReviews:   CP001011_GR
- KEGG:   xfn:XfasM23_0086
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- ProtClustDB:   PRK09354
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 37657; Mature: 37657

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDENKKRALSVALSQIEKQFGKGSVMRMGDRVIEAVEAIPTGSLMLDLALGIGGLPKGRV
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCE
VEIYGPESSGKTTLTLQAIAQCQKRGGTAAFIDAEHALDPIYAGKLGVNVDDLLLSQPDT
EEEECCCCCCCEEEEHHHHHHHHHCCCCEEEEEHHHHCCCHHCCCCCCCHHHHHCCCCCC
GEQALEIADMLVRSGSIDIMVIDSVAALTPRAEIEGEMGDQLPGLQARLMSQALRKLTGN
CHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
IKRSNTLVIFINQLRMKIGIMMPGQSPETTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
CCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCHHHC
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIEMGVEAKLVEKAGAWYSYGGERIG
CCCEEEEHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHCCCHHHCCCCCCC
QGKDNARGYLRENPHFAAKLEADLREKFEPTELSREEGDEDTLEDAM
CCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCCHHCCCHHHHHHCC
>Mature Secondary Structure
MDENKKRALSVALSQIEKQFGKGSVMRMGDRVIEAVEAIPTGSLMLDLALGIGGLPKGRV
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCE
VEIYGPESSGKTTLTLQAIAQCQKRGGTAAFIDAEHALDPIYAGKLGVNVDDLLLSQPDT
EEEECCCCCCCEEEEHHHHHHHHHCCCCEEEEEHHHHCCCHHCCCCCCCHHHHHCCCCCC
GEQALEIADMLVRSGSIDIMVIDSVAALTPRAEIEGEMGDQLPGLQARLMSQALRKLTGN
CHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
IKRSNTLVIFINQLRMKIGIMMPGQSPETTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
CCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCHHHC
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIEMGVEAKLVEKAGAWYSYGGERIG
CCCEEEEHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHCCCHHHCCCCCCC
QGKDNARGYLRENPHFAAKLEADLREKFEPTELSREEGDEDTLEDAM
CCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCCHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA