Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is kgtP [H]
Identifier: 182680627
GI number: 182680627
Start: 85213
End: 86520
Strand: Reverse
Name: kgtP [H]
Synonym: XfasM23_0056
Alternate gene names: 182680627
Gene position: 86520-85213 (Counterclockwise)
Preceding gene: 182680628
Following gene: 182680626
Centisome position: 3.41
GC content: 51.53
Gene sequence:
>1308_bases ATGTCCGACAGCCTCTCCACTGCACTTTCACACTACACAGCAGAGGAGAAGCGCCATCGCATTTTCGCGATCATCGCCGT TTCCTCCGGCAACTTAGTCGAATGGTTCGACTTTTACGTCTACGCATTCACCGCGCTGTATTTTTCCTCCCAGTTTTTCC CTGAGTCCAATCAAACCGCACAATTACTCAACACTGCCGCAATCTTTGGTGCAGGCTTCTTGATGCGGCCTATCGGCGGC TGGCTGTTCGGCCGGATTGCCGATCGCTACGGACGCAAACGCTCGTTATTGATCTCGGTAATGATGATGTGTGGCGGTTC AATGGTGATCGCCACGCTTCCTACCCATCATATGATCGGTGCCTGGGCGGCGTTTTTATTACTACTCGCACGTCTGATAC AGGGTCTGTCGGTAGGTGGTGAGTACGGTTCTACCGCAACTTACATGAGTGAAATTGCGCTGCGTGGACGACGCGGCTTC TATTCCTCGTTCCAGTACGTCACGTTGATCGGCGGCCAGTTGCTAGCAGTGTTGACTCTGGTGGTGCTGGAAGCTTTATT CACTGAAGTTCAAATGCGCGCCTGGGGTTGGCGTATTCCATTCATGATCGGTGCGATTGCCGCAGCAGTTGCGTTATTAC TACGCCGCACACTGAACGAAACTCAATCAGAGGATAACCGACATGACACCCATGCTGGTTCACTATCAACCCTGTTCCGC GAGCACCGCACTGCATTCCTAACCGTATTTGGATATACCGCTGGCGGCTCGCTGATTTTTTACACTTTCACCACCTATAT GCAGAAGTTCCTAGTCAACAGTTCCGGCTTATCCAAACAGACTGCTAGTCTGGTGATGAGTGGCGCACTGTTTGTCTATA TGTGCATTCAACCATTGTTCGGCCTACTGTCGGACTATATCGGGCGGCGCAACAACATGCTGCTATTTGGTGGGTTAGGT GCGGTCTGTACTGTACCGATCCTCGCAACATTACAGCGTATTCATTCACCACTACCCGCATTTATATTGATCGTAGGAGC GTTGTCGATTATCAGCTTCTACACCTCCATCTCCGCCATCGTGAAAGCCGAGATGTTCCCAGCAAAAGTACGGGCGCTAG GTGTGGGCTTCGCCTACGCAGTAGGTAACGCCATATTTGGTGGTTCGGCCGAATATATTGCCCTGGGACTGAAGAGCTTC GATCTAGAAACGGTGTTCTTCTGGTACGTGGCAGCAATGATGGCGGTCGTATTCTTGGTCAGTTTGCGCCTACCACGGCA AGCCACGTACCTGCATCATGACCATTAA
Upstream 100 bases:
>100_bases TGATGCTTGGACTCCAACTCTGCACTCAAAGTATGTATCCGCCGAATACTAGGTGCTACCAAACTTAAAACTTTTGACAG CATTACGGAGCGCCCTTTTG
Downstream 100 bases:
>100_bases AACATGCACCGATTTTATAGAAGACAATCAAGTTCAGTTCAACGAAAACAACTACCCTCCTCTTTAATGCGTACCGAAAA TGCCAACCGACCAGCAGATC
Product: major facilitator transporter
Products: Proton [Cytoplasm]; 2-oxoglutarate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSDSLSTALSHYTAEEKRHRIFAIIAVSSGNLVEWFDFYVYAFTALYFSSQFFPESNQTAQLLNTAAIFGAGFLMRPIGG WLFGRIADRYGRKRSLLISVMMMCGGSMVIATLPTHHMIGAWAAFLLLLARLIQGLSVGGEYGSTATYMSEIALRGRRGF YSSFQYVTLIGGQLLAVLTLVVLEALFTEVQMRAWGWRIPFMIGAIAAAVALLLRRTLNETQSEDNRHDTHAGSLSTLFR EHRTAFLTVFGYTAGGSLIFYTFTTYMQKFLVNSSGLSKQTASLVMSGALFVYMCIQPLFGLLSDYIGRRNNMLLFGGLG AVCTVPILATLQRIHSPLPAFILIVGALSIISFYTSISAIVKAEMFPAKVRALGVGFAYAVGNAIFGGSAEYIALGLKSF DLETVFFWYVAAMMAVVFLVSLRLPRQATYLHHDH
Sequences:
>Translated_435_residues MSDSLSTALSHYTAEEKRHRIFAIIAVSSGNLVEWFDFYVYAFTALYFSSQFFPESNQTAQLLNTAAIFGAGFLMRPIGG WLFGRIADRYGRKRSLLISVMMMCGGSMVIATLPTHHMIGAWAAFLLLLARLIQGLSVGGEYGSTATYMSEIALRGRRGF YSSFQYVTLIGGQLLAVLTLVVLEALFTEVQMRAWGWRIPFMIGAIAAAVALLLRRTLNETQSEDNRHDTHAGSLSTLFR EHRTAFLTVFGYTAGGSLIFYTFTTYMQKFLVNSSGLSKQTASLVMSGALFVYMCIQPLFGLLSDYIGRRNNMLLFGGLG AVCTVPILATLQRIHSPLPAFILIVGALSIISFYTSISAIVKAEMFPAKVRALGVGFAYAVGNAIFGGSAEYIALGLKSF DLETVFFWYVAAMMAVVFLVSLRLPRQATYLHHDH >Mature_434_residues SDSLSTALSHYTAEEKRHRIFAIIAVSSGNLVEWFDFYVYAFTALYFSSQFFPESNQTAQLLNTAAIFGAGFLMRPIGGW LFGRIADRYGRKRSLLISVMMMCGGSMVIATLPTHHMIGAWAAFLLLLARLIQGLSVGGEYGSTATYMSEIALRGRRGFY SSFQYVTLIGGQLLAVLTLVVLEALFTEVQMRAWGWRIPFMIGAIAAAVALLLRRTLNETQSEDNRHDTHAGSLSTLFRE HRTAFLTVFGYTAGGSLIFYTFTTYMQKFLVNSSGLSKQTASLVMSGALFVYMCIQPLFGLLSDYIGRRNNMLLFGGLGA VCTVPILATLQRIHSPLPAFILIVGALSIISFYTSISAIVKAEMFPAKVRALGVGFAYAVGNAIFGGSAEYIALGLKSFD LETVFFWYVAAMMAVVFLVSLRLPRQATYLHHDH
Specific function: Uptake of alpha-ketoglutarate across the boundary membrane with the concomitant import of a cation (symport system) [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1788942, Length=427, Percent_Identity=64.1686182669789, Blast_Score=524, Evalue=1e-150, Organism=Escherichia coli, GI1790550, Length=386, Percent_Identity=32.6424870466321, Blast_Score=189, Evalue=4e-49, Organism=Escherichia coli, GI1788292, Length=382, Percent_Identity=31.6753926701571, Blast_Score=169, Evalue=4e-43, Organism=Escherichia coli, GI1789941, Length=409, Percent_Identity=31.7848410757946, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI87082231, Length=455, Percent_Identity=26.5934065934066, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87082404, Length=398, Percent_Identity=23.3668341708543, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 47919; Mature: 47788
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSLSTALSHYTAEEKRHRIFAIIAVSSGNLVEWFDFYVYAFTALYFSSQFFPESNQTA CCCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH QLLNTAAIFGAGFLMRPIGGWLFGRIADRYGRKRSLLISVMMMCGGSMVIATLPTHHMIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCHHHHH AWAAFLLLLARLIQGLSVGGEYGSTATYMSEIALRGRRGFYSSFQYVTLIGGQLLAVLTL HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VVLEALFTEVQMRAWGWRIPFMIGAIAAAVALLLRRTLNETQSEDNRHDTHAGSLSTLFR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH EHRTAFLTVFGYTAGGSLIFYTFTTYMQKFLVNSSGLSKQTASLVMSGALFVYMCIQPLF HHHHEEEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH GLLSDYIGRRNNMLLFGGLGAVCTVPILATLQRIHSPLPAFILIVGALSIISFYTSISAI HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VKAEMFPAKVRALGVGFAYAVGNAIFGGSAEYIALGLKSFDLETVFFWYVAAMMAVVFLV HHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHEEEECHHCCHHHHHHHHHHHHHHHHHHH SLRLPRQATYLHHDH HHCCCCHHCCCCCCC >Mature Secondary Structure SDSLSTALSHYTAEEKRHRIFAIIAVSSGNLVEWFDFYVYAFTALYFSSQFFPESNQTA CCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH QLLNTAAIFGAGFLMRPIGGWLFGRIADRYGRKRSLLISVMMMCGGSMVIATLPTHHMIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCHHHHH AWAAFLLLLARLIQGLSVGGEYGSTATYMSEIALRGRRGFYSSFQYVTLIGGQLLAVLTL HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VVLEALFTEVQMRAWGWRIPFMIGAIAAAVALLLRRTLNETQSEDNRHDTHAGSLSTLFR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH EHRTAFLTVFGYTAGGSLIFYTFTTYMQKFLVNSSGLSKQTASLVMSGALFVYMCIQPLF HHHHEEEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH GLLSDYIGRRNNMLLFGGLGAVCTVPILATLQRIHSPLPAFILIVGALSIISFYTSISAI HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VKAEMFPAKVRALGVGFAYAVGNAIFGGSAEYIALGLKSFDLETVFFWYVAAMMAVVFLV HHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHEEEECHHCCHHHHHHHHHHHHHHHHHHH SLRLPRQATYLHHDH HHCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 2-oxoglutarate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 2-oxoglutarate [Periplasm] = Proton [Cytoplasm] + 2-oxoglutarate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2118499; 9205837; 9278503; 1709493; 2190187; 2053984; 8419306 [H]