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The map label for this gene is tonB [H]

Identifier: 182680581

GI number: 182680581

Start: 10574

End: 11239

Strand: Direct

Name: tonB [H]

Synonym: XfasM23_0009

Alternate gene names: 182680581

Gene position: 10574-11239 (Clockwise)

Preceding gene: 182680580

Following gene: 182680582

Centisome position: 0.42

GC content: 52.1

Gene sequence:

>666_bases
ATGTCGGAAGAACTTATTGTCCATAGGTATGAGCAGGACGATGTGAGCGATGCTTTAAATTGGCCTCGTATCCTTGGTAT
TGCTTTTGTAATCGCATTGCATCTTGCTGCTTTTATGCTATTACTGATTCCTGCTGGGTCACTCAAGGCTCCGCCCGAGA
AGCAACGCCTTGCGGCGGTAACAATTGTGGATTCCCCGCCGCCGCCGCCACCACCACCACCACCGCAAGAGGAGAAAAAA
CCAGCGCCCCCTATCAAGACTTTGGCACCACCACGTCCTGCGCCAGTCCCTCCGCCGCCACAACCTCCAGTCGTGGATGT
TCCTCAGCCTCGTCCAAGCGATGTTGTTGTGCCGCCTGCGCCGCCTGCGCCGCCGACTCCTCCGAGCGACATCAGTGCCA
GCGTAGATATTTCGTCAAAGAAAATGAACCCACCGAAGTACCCGCCTACTGCTTTACGGGCTGGTATCCAGGGTGAGGTT
GTGTTGATCATTGACGTAGATGCTGATGGTAACGTTACTAATGTGTCTGTCGAGAAATCTAGCCGTAATCGGGATCTTGA
TCGTGCTGCAATAGATGCCGCTTCTAAATGGAAGTTTAATCCTTCAGTGATCAATGGAAAGAAATCTGCTGGTCGTGTCC
GTGTACCGGTCAATTTTTCACTATAG

Upstream 100 bases:

>100_bases
GATTGGTATAAGCTTAGAAACTGTTGCGGTGTCAATCACTGCTTGATTTAGGGATCGCTTTTGCGGTCCGTGCCTTCACT
GTTATAGAGCCCATTGGCAC

Downstream 100 bases:

>100_bases
GCAATAATACTATGGACTGGTCCGACCAGTTCAGGTTATCTGTACTCCCTTAAAACACCACGCTTTATCATCAACAACAT
TAAAAGGTAAGTGTCATGTT

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSEELIVHRYEQDDVSDALNWPRILGIAFVIALHLAAFMLLLIPAGSLKAPPEKQRLAAVTIVDSPPPPPPPPPPQEEKK
PAPPIKTLAPPRPAPVPPPPQPPVVDVPQPRPSDVVVPPAPPAPPTPPSDISASVDISSKKMNPPKYPPTALRAGIQGEV
VLIIDVDADGNVTNVSVEKSSRNRDLDRAAIDAASKWKFNPSVINGKKSAGRVRVPVNFSL

Sequences:

>Translated_221_residues
MSEELIVHRYEQDDVSDALNWPRILGIAFVIALHLAAFMLLLIPAGSLKAPPEKQRLAAVTIVDSPPPPPPPPPPQEEKK
PAPPIKTLAPPRPAPVPPPPQPPVVDVPQPRPSDVVVPPAPPAPPTPPSDISASVDISSKKMNPPKYPPTALRAGIQGEV
VLIIDVDADGNVTNVSVEKSSRNRDLDRAAIDAASKWKFNPSVINGKKSAGRVRVPVNFSL
>Mature_220_residues
SEELIVHRYEQDDVSDALNWPRILGIAFVIALHLAAFMLLLIPAGSLKAPPEKQRLAAVTIVDSPPPPPPPPPPQEEKKP
APPIKTLAPPRPAPVPPPPQPPVVDVPQPRPSDVVVPPAPPAPPTPPSDISASVDISSKKMNPPKYPPTALRAGIQGEVV
LIIDVDADGNVTNVSVEKSSRNRDLDRAAIDAASKWKFNPSVINGKKSAGRVRVPVNFSL

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 23538; Mature: 23407

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEELIVHRYEQDDVSDALNWPRILGIAFVIALHLAAFMLLLIPAGSLKAPPEKQRLAAV
CCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEE
TIVDSPPPPPPPPPPQEEKKPAPPIKTLAPPRPAPVPPPPQPPVVDVPQPRPSDVVVPPA
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCC
PPAPPTPPSDISASVDISSKKMNPPKYPPTALRAGIQGEVVLIIDVDADGNVTNVSVEKS
CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCEEEEEEECC
SRNRDLDRAAIDAASKWKFNPSVINGKKSAGRVRVPVNFSL
CCCCCHHHHHHHHHHCCCCCCCEECCCCCCCEEEEEEEECC
>Mature Secondary Structure 
SEELIVHRYEQDDVSDALNWPRILGIAFVIALHLAAFMLLLIPAGSLKAPPEKQRLAAV
CCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEE
TIVDSPPPPPPPPPPQEEKKPAPPIKTLAPPRPAPVPPPPQPPVVDVPQPRPSDVVVPPA
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCC
PPAPPTPPSDISASVDISSKKMNPPKYPPTALRAGIQGEVVLIIDVDADGNVTNVSVEKS
CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCCCEEEEEEECC
SRNRDLDRAAIDAASKWKFNPSVINGKKSAGRVRVPVNFSL
CCCCCHHHHHHHHHHCCCCCCCEECCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371459 [H]