Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is 182677511
Identifier: 182677511
GI number: 182677511
Start: 569493
End: 571271
Strand: Direct
Name: 182677511
Synonym: Bind_0516
Alternate gene names: NA
Gene position: 569493-571271 (Clockwise)
Preceding gene: 182677510
Following gene: 182677512
Centisome position: 13.66
GC content: 49.18
Gene sequence:
>1779_bases ATGGCGGCTTCAAGTAAGGCTTCGTGGCTCTCTCGGTGGTTTCGCCTGAAACACTATTCGGCTGCCATTGATGCTACTTC GATCGAAGGGGCTTCTATCGAGGATGTTCTTGCCGTTTCGGAAGAGGGCGTGCTAGCCGCTGTGACGACCGAAAAGGTTC CACCTGAGGACCTTCTGGTTGATCATCATCACCTGGAAATTGCCGCGCCCTATTTCGACAAAAGCTATTATCTTGCCAAG AATACGGATGTTAGAGACGCTAATATTGATCCGCTGAAGCATTTTTTAATCTGGGGATGGCGTGAGCGTCGGAATCCAAG CCTTTCTTTCGACGTGAATTTCTATCTGCAAACATATCCTGACGTCGCCGCCGCTGACGTGAATCCTTTGATTCATTTCA TTATGGCTGGGCAGGCGGAGGGACGGGAGGCGCGGGATCCACTGGGGATATGGCGGCGGCGTTTAGAAGCTGCGCGAGCG CCCTCCAAAGGAGGGACTGCGGCTTCTTTGAACAATCAGGCTGTGGACCAGATCGATGGCGATGAGTTGATTGATCGTTT AAACATCAGTCAAATGGGTAGCGGGCTCATCATTTCATTCAGCCATGATGACTATACTCGTAGTTGCGGTGGCGTGCAGA ATGTCATTGTTGACGAGCAAAAGGCTTTTAACCGCGCTCAGTGGAACTACCTTCACGTCTCTCCCATGAGGCCGCTGCAA AGTCTGGCTGATATTCTTACGATTCCGGCGGATTTCATCGTCGCGATACGCATTGATGGAACATTTCTGGGGCATATAGC TTTTGATGAGTTCATCGCTGCACTTGTTAAGACAGAGGCGCGAGAAAGAGGCATTAAATGTATAATACACCATTTGATGG GGTTCTCTCCCGAGTTAATTTTAAAGTTATTTGATATTACTCAAATAAAAAGCCCCGTTGTTTGGGTTCATGACCTATTT ACAGTATGTGAAAACTATACATTGCTTCGCAATGATATTACGTTCTGTGGTGGTCCACCTCCGGATTCCATGGCTTGCGA TATATGCTGTTACGGTGAAGGGCGATCCGAACACTACGGGAGAATTCAGAATTTCTTTCAAACAACACATCCTATCGTAC TCGCCCCTTCGGAATTTGCTCTCGAGAAATGGCGGCATTTCGAATTGCCGCATCAACAAGGTGTCGTCGTACCTCCGGCT CGGTTGGTGTTTGCCGAAGAACGATTTTCGATACATACGGCTCCACAACAGACATTACGCGTTGCCTATGTCGGACAACG AGTCTTCCATAAGGGATGGTCTGTTTTTGAGGAACTCGCTCTCCGTTTTAGACAAGATCAACGATATGAATTCATTCAAC TAGGCATGCCTTCCCACGAGGTCGTGCTGCCTGATTGTATTGGATATTGCCATGTCCAAGTTGGGCCAGATGATCATGAT GCGATGATCCATGCGTTGGCGGCCGCGCATATTGACATTGTTGTCCTTTGGCCTATGTGGCCAGAAACATTCTGCTATGT AGCGCATGAAGCCCTGGCAGCCGGCGTATTCATTGTAACCCATAAGGGTGCAGGAAATGTTGATCCCGTTGTCACTGTGC AAGCCCCGGAGCAGGGAATTGTGCTGCCGGATCAGTCAAGCTTATTTGCTTTATTTGAAACGGGTGACATTATCCAACTT GCTACGAAAGCCGTGCGCCGTCGCGGCGCTCTGATAGCGGGAGGCGGCACCGCAGATTGGTTGTTACGGGATAATCCTGC TCTCCTGGCATTTGGATAA
Upstream 100 bases:
>100_bases GCGGAAAATTTTATTCGAGATGATTTATAGAAACCGCAGCACATAATCGAAGTTTGTGTGACTAATTCATGACAGCGAAA AATTCGTGAGTAATTTAAAA
Downstream 100 bases:
>100_bases AGAAGTTTAGAGGACGGTCGACGGCATATGAGTGAAATTCACTGCTTTACAAGCGCCTCCTTCTCCTATCTGGATCGGGT GCGGGTTCTCGGACAAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 592; Mature: 591
Protein sequence:
>592_residues MAASSKASWLSRWFRLKHYSAAIDATSIEGASIEDVLAVSEEGVLAAVTTEKVPPEDLLVDHHHLEIAAPYFDKSYYLAK NTDVRDANIDPLKHFLIWGWRERRNPSLSFDVNFYLQTYPDVAAADVNPLIHFIMAGQAEGREARDPLGIWRRRLEAARA PSKGGTAASLNNQAVDQIDGDELIDRLNISQMGSGLIISFSHDDYTRSCGGVQNVIVDEQKAFNRAQWNYLHVSPMRPLQ SLADILTIPADFIVAIRIDGTFLGHIAFDEFIAALVKTEARERGIKCIIHHLMGFSPELILKLFDITQIKSPVVWVHDLF TVCENYTLLRNDITFCGGPPPDSMACDICCYGEGRSEHYGRIQNFFQTTHPIVLAPSEFALEKWRHFELPHQQGVVVPPA RLVFAEERFSIHTAPQQTLRVAYVGQRVFHKGWSVFEELALRFRQDQRYEFIQLGMPSHEVVLPDCIGYCHVQVGPDDHD AMIHALAAAHIDIVVLWPMWPETFCYVAHEALAAGVFIVTHKGAGNVDPVVTVQAPEQGIVLPDQSSLFALFETGDIIQL ATKAVRRRGALIAGGGTADWLLRDNPALLAFG
Sequences:
>Translated_592_residues MAASSKASWLSRWFRLKHYSAAIDATSIEGASIEDVLAVSEEGVLAAVTTEKVPPEDLLVDHHHLEIAAPYFDKSYYLAK NTDVRDANIDPLKHFLIWGWRERRNPSLSFDVNFYLQTYPDVAAADVNPLIHFIMAGQAEGREARDPLGIWRRRLEAARA PSKGGTAASLNNQAVDQIDGDELIDRLNISQMGSGLIISFSHDDYTRSCGGVQNVIVDEQKAFNRAQWNYLHVSPMRPLQ SLADILTIPADFIVAIRIDGTFLGHIAFDEFIAALVKTEARERGIKCIIHHLMGFSPELILKLFDITQIKSPVVWVHDLF TVCENYTLLRNDITFCGGPPPDSMACDICCYGEGRSEHYGRIQNFFQTTHPIVLAPSEFALEKWRHFELPHQQGVVVPPA RLVFAEERFSIHTAPQQTLRVAYVGQRVFHKGWSVFEELALRFRQDQRYEFIQLGMPSHEVVLPDCIGYCHVQVGPDDHD AMIHALAAAHIDIVVLWPMWPETFCYVAHEALAAGVFIVTHKGAGNVDPVVTVQAPEQGIVLPDQSSLFALFETGDIIQL ATKAVRRRGALIAGGGTADWLLRDNPALLAFG >Mature_591_residues AASSKASWLSRWFRLKHYSAAIDATSIEGASIEDVLAVSEEGVLAAVTTEKVPPEDLLVDHHHLEIAAPYFDKSYYLAKN TDVRDANIDPLKHFLIWGWRERRNPSLSFDVNFYLQTYPDVAAADVNPLIHFIMAGQAEGREARDPLGIWRRRLEAARAP SKGGTAASLNNQAVDQIDGDELIDRLNISQMGSGLIISFSHDDYTRSCGGVQNVIVDEQKAFNRAQWNYLHVSPMRPLQS LADILTIPADFIVAIRIDGTFLGHIAFDEFIAALVKTEARERGIKCIIHHLMGFSPELILKLFDITQIKSPVVWVHDLFT VCENYTLLRNDITFCGGPPPDSMACDICCYGEGRSEHYGRIQNFFQTTHPIVLAPSEFALEKWRHFELPHQQGVVVPPAR LVFAEERFSIHTAPQQTLRVAYVGQRVFHKGWSVFEELALRFRQDQRYEFIQLGMPSHEVVLPDCIGYCHVQVGPDDHDA MIHALAAAHIDIVVLWPMWPETFCYVAHEALAAGVFIVTHKGAGNVDPVVTVQAPEQGIVLPDQSSLFALFETGDIIQLA TKAVRRRGALIAGGGTADWLLRDNPALLAFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66089; Mature: 65958
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASSKASWLSRWFRLKHYSAAIDATSIEGASIEDVLAVSEEGVLAAVTTEKVPPEDLLV CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCEEEEEECCCCCCHHHEE DHHHLEIAAPYFDKSYYLAKNTDVRDANIDPLKHFLIWGWRERRNPSLSFDVNFYLQTYP CCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHEECHHHCCCCCEEEEEEEEEEECC DVAAADVNPLIHFIMAGQAEGREARDPLGIWRRRLEAARAPSKGGTAASLNNQAVDQIDG CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCHHHCCCH DELIDRLNISQMGSGLIISFSHDDYTRSCGGVQNVIVDEQKAFNRAQWNYLHVSPMRPLQ HHHHHHCCHHHCCCCEEEEECCCCHHHHCCCHHHHEECCHHHHCCCCCCEEEECCCCHHH SLADILTIPADFIVAIRIDGTFLGHIAFDEFIAALVKTEARERGIKCIIHHLMGFSPELI HHHHHHHCCCCEEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LKLFDITQIKSPVVWVHDLFTVCENYTLLRNDITFCGGPPPDSMACDICCYGEGRSEHYG HHHHHHHHHCCCEEHHHHHHHHHCCCEEEECCEEECCCCCCCCCEEEEEEECCCCCHHHH RIQNFFQTTHPIVLAPSEFALEKWRHFELPHQQGVVVPPARLVFAEERFSIHTAPQQTLR HHHHHHHCCCCEEECCHHHHHHHHHHCCCCCCCCEECCCHHEEEECCCCEEECCHHHHHH VAYVGQRVFHKGWSVFEELALRFRQDQRYEFIQLGMPSHEVVLPDCIGYCHVQVGPDDHD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEECCCCCCEEEEEECCCCHH AMIHALAAAHIDIVVLWPMWPETFCYVAHEALAAGVFIVTHKGAGNVDPVVTVQAPEQGI HHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEECCCCCE VLPDQSSLFALFETGDIIQLATKAVRRRGALIAGGGTADWLLRDNPALLAFG EECCCCCEEEEEECCCHHHHHHHHHHHCCCEEECCCCEEEEEECCCEEEEEC >Mature Secondary Structure AASSKASWLSRWFRLKHYSAAIDATSIEGASIEDVLAVSEEGVLAAVTTEKVPPEDLLV CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCEEEEEECCCCCCHHHEE DHHHLEIAAPYFDKSYYLAKNTDVRDANIDPLKHFLIWGWRERRNPSLSFDVNFYLQTYP CCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHEECHHHCCCCCEEEEEEEEEEECC DVAAADVNPLIHFIMAGQAEGREARDPLGIWRRRLEAARAPSKGGTAASLNNQAVDQIDG CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCHHHCCCH DELIDRLNISQMGSGLIISFSHDDYTRSCGGVQNVIVDEQKAFNRAQWNYLHVSPMRPLQ HHHHHHCCHHHCCCCEEEEECCCCHHHHCCCHHHHEECCHHHHCCCCCCEEEECCCCHHH SLADILTIPADFIVAIRIDGTFLGHIAFDEFIAALVKTEARERGIKCIIHHLMGFSPELI HHHHHHHCCCCEEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LKLFDITQIKSPVVWVHDLFTVCENYTLLRNDITFCGGPPPDSMACDICCYGEGRSEHYG HHHHHHHHHCCCEEHHHHHHHHHCCCEEEECCEEECCCCCCCCCEEEEEEECCCCCHHHH RIQNFFQTTHPIVLAPSEFALEKWRHFELPHQQGVVVPPARLVFAEERFSIHTAPQQTLR HHHHHHHCCCCEEECCHHHHHHHHHHCCCCCCCCEECCCHHEEEECCCCEEECCHHHHHH VAYVGQRVFHKGWSVFEELALRFRQDQRYEFIQLGMPSHEVVLPDCIGYCHVQVGPDDHD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEECCCCCCEEEEEECCCCHH AMIHALAAAHIDIVVLWPMWPETFCYVAHEALAAGVFIVTHKGAGNVDPVVTVQAPEQGI HHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEECCCCCE VLPDQSSLFALFETGDIIQLATKAVRRRGALIAGGGTADWLLRDNPALLAFG EECCCCCEEEEEECCCHHHHHHHHHHHCCCEEECCCCEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA