Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is 182677500
Identifier: 182677500
GI number: 182677500
Start: 560248
End: 560706
Strand: Direct
Name: 182677500
Synonym: Bind_0504
Alternate gene names: NA
Gene position: 560248-560706 (Clockwise)
Preceding gene: 182677499
Following gene: 182677501
Centisome position: 13.43
GC content: 55.99
Gene sequence:
>459_bases ATGGAGAATCTTGAGCCTGTTCTGAGGCAGCATCCATTCTTCGCCGGTTTCGCTCCGAAGCATTTTGAGCTCGTGACAGG CTGTGCCCGCAATCATCGTTTCGAGGCAGGGCACTATCTGTTTCGTGAAGGCGAGCCTGCAAATGAGTTCTTCCTGATCC GTCACGGCAAAGTCGCTCTCGAAATCGTCGCGCCAGGACAAAATCCGATCGTCTTTGCGACGCTTGGCGATGGAGAGATC GTCGGTGTGTCCTGGCTCATCCCGCCTTACCAGTGGACATTCGACGCACGCGCTGTGGAACTCACCCAGGCCATTGGCGT CGATGCCGCATGTCTGCGCGGGAAATGCGAAGCGGATCACCATTTCGGCTATGAGATGATGAAACTTTTCCTGCCGCTCC TGGTGCAGCGGCTCCAGGCGACCAGACTGCAGATCCTCGACATCTATGGAAAGCATTGA
Upstream 100 bases:
>100_bases GGCTGTGGCCGTTGCATTACCTGGTGCCCGGTGGGCATCGACATTACGGAAGAGACGGCCGCCATCAGGGCCGCTCCGCA CCCCGCCCGAGGGCAACAGC
Downstream 100 bases:
>100_bases CATGGGTGTGATGGACATGAGTGCCACCGATATGGGCTTGATGCCATGCCCCGATCCATTCCTCCCGCAGCTCTATCGTG TCAGTCGGGTTCTCCGCGAG
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: Regulatory Protein; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator Crp/Fnr Family; Crp-Like Protein; LOW QUALITY PROTEIN Regulator Protein; CRP-Like Regulatory Protein; Transcriptional Regulator Crp Family
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MENLEPVLRQHPFFAGFAPKHFELVTGCARNHRFEAGHYLFREGEPANEFFLIRHGKVALEIVAPGQNPIVFATLGDGEI VGVSWLIPPYQWTFDARAVELTQAIGVDAACLRGKCEADHHFGYEMMKLFLPLLVQRLQATRLQILDIYGKH
Sequences:
>Translated_152_residues MENLEPVLRQHPFFAGFAPKHFELVTGCARNHRFEAGHYLFREGEPANEFFLIRHGKVALEIVAPGQNPIVFATLGDGEI VGVSWLIPPYQWTFDARAVELTQAIGVDAACLRGKCEADHHFGYEMMKLFLPLLVQRLQATRLQILDIYGKH >Mature_152_residues MENLEPVLRQHPFFAGFAPKHFELVTGCARNHRFEAGHYLFREGEPANEFFLIRHGKVALEIVAPGQNPIVFATLGDGEI VGVSWLIPPYQWTFDARAVELTQAIGVDAACLRGKCEADHHFGYEMMKLFLPLLVQRLQATRLQILDIYGKH
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17229; Mature: 17229
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENLEPVLRQHPFFAGFAPKHFELVTGCARNHRFEAGHYLFREGEPANEFFLIRHGKVAL CCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCEEE EIVAPGQNPIVFATLGDGEIVGVSWLIPPYQWTFDARAVELTQAIGVDAACLRGKCEADH EEEECCCCCEEEEEECCCCEEEEEEECCCEEEEECCHHHHHHHHHCCCHHHHCCCCCCCC HFGYEMMKLFLPLLVQRLQATRLQILDIYGKH CCCHHHHHHHHHHHHHHHHHHHEEEEEEECCC >Mature Secondary Structure MENLEPVLRQHPFFAGFAPKHFELVTGCARNHRFEAGHYLFREGEPANEFFLIRHGKVAL CCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCEEE EIVAPGQNPIVFATLGDGEIVGVSWLIPPYQWTFDARAVELTQAIGVDAACLRGKCEADH EEEECCCCCEEEEEECCCCEEEEEEECCCEEEEECCHHHHHHHHHCCCHHHHCCCCCCCC HFGYEMMKLFLPLLVQRLQATRLQILDIYGKH CCCHHHHHHHHHHHHHHHHHHHEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA