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The map label for this gene is 182677379

Identifier: 182677379

GI number: 182677379

Start: 442996

End: 443799

Strand: Direct

Name: 182677379

Synonym: Bind_0383

Alternate gene names: NA

Gene position: 442996-443799 (Clockwise)

Preceding gene: 182677378

Following gene: 182677382

Centisome position: 10.62

GC content: 51.24

Gene sequence:

>804_bases
ATGGCTCCGCGCGCATTTTGGGAAGGCTACCTGAAACTTTCTCTCGTGACCTGTGCGGTTGCGATGACGCCGGCAATATC
CGAGCGTGAGAAGGTACGTTTTCACACACTCAATCGCAAGACCGGTCACCGGATTCTCAGTCAATATGTCGATGCAGAGA
CTGGAAAGCCTGTTGAGGAAGCCGATGAGGTCAAGGGTTATCAACGGGGTGAAAATGATTATGTCATGCTTGAGGATGCT
GAAATAGATGCTGTCCGGCTGGAGAGCACGCATACTATCGATATTGATATGTTTGTTCCTCATGATAGTGTCGGGTTAAT
CTGGTATGATAGACCCCATTACCTGATACCCAATGATACTGTTGGGGAAGAGGCTTTTTGCGTCATCCGTGATGCCATGA
CATCGACCAATATGGTTGGAATGTCACGCTTGGTCCTTTATCGCCGGGAACGCGCGGTCATGCTCGAACCCCGTGATAAA
GGGATCATTCTCTGGACCTTGCATTACGGGGATGAGGTGCGCCGCGAGGAGGATTATTTCGAGGGCATCAAGGACAGTAG
GCCTGATCCAAAAGTGATGACGCTCGTCGAGACATTGATCGATGAACGGACCAAGCCCTGGGATCCCGCCATGGTCACTG
ATCCCGTACAAGATCGCCTGCTGGAGATTATCGCGTCTAAAAAGAAGGGCAAGAAACCCATCAAGCCCAAAGCCGTGGCC
GAAGCGCCGAGCAATGTCATCAATATCATGGACGCCTTGCGTCACAGTCTGGCTTCGGAAAGCAAATCGCCGAAGAAGGA
TTAG

Upstream 100 bases:

>100_bases
TTAAACCGTATCCACCTCATTGAACCCGACTCGTCGCGGTTCAATGAGGGTGGATACTAGAGCATTGGCATGATCATCCC
AGGCCATGGAGATTGAGCGA

Downstream 100 bases:

>100_bases
AGCATCAAGACAGACAGCATCACCCGTTCACGCTGACGCAGGCCGGATGATCTCTTCCTGGCTTTTGGGACCGTTCATCC
TTTTGGGACGGTCTTTTTTT

Product: Ku protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MAPRAFWEGYLKLSLVTCAVAMTPAISEREKVRFHTLNRKTGHRILSQYVDAETGKPVEEADEVKGYQRGENDYVMLEDA
EIDAVRLESTHTIDIDMFVPHDSVGLIWYDRPHYLIPNDTVGEEAFCVIRDAMTSTNMVGMSRLVLYRRERAVMLEPRDK
GIILWTLHYGDEVRREEDYFEGIKDSRPDPKVMTLVETLIDERTKPWDPAMVTDPVQDRLLEIIASKKKGKKPIKPKAVA
EAPSNVINIMDALRHSLASESKSPKKD

Sequences:

>Translated_267_residues
MAPRAFWEGYLKLSLVTCAVAMTPAISEREKVRFHTLNRKTGHRILSQYVDAETGKPVEEADEVKGYQRGENDYVMLEDA
EIDAVRLESTHTIDIDMFVPHDSVGLIWYDRPHYLIPNDTVGEEAFCVIRDAMTSTNMVGMSRLVLYRRERAVMLEPRDK
GIILWTLHYGDEVRREEDYFEGIKDSRPDPKVMTLVETLIDERTKPWDPAMVTDPVQDRLLEIIASKKKGKKPIKPKAVA
EAPSNVINIMDALRHSLASESKSPKKD
>Mature_266_residues
APRAFWEGYLKLSLVTCAVAMTPAISEREKVRFHTLNRKTGHRILSQYVDAETGKPVEEADEVKGYQRGENDYVMLEDAE
IDAVRLESTHTIDIDMFVPHDSVGLIWYDRPHYLIPNDTVGEEAFCVIRDAMTSTNMVGMSRLVLYRRERAVMLEPRDKG
IILWTLHYGDEVRREEDYFEGIKDSRPDPKVMTLVETLIDERTKPWDPAMVTDPVQDRLLEIIASKKKGKKPIKPKAVAE
APSNVINIMDALRHSLASESKSPKKD

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 30528; Mature: 30397

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPRAFWEGYLKLSLVTCAVAMTPAISEREKVRFHTLNRKTGHRILSQYVDAETGKPVEE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEECCCHHHHHHHHHHHCCCCCCCHHH
ADEVKGYQRGENDYVMLEDAEIDAVRLESTHTIDIDMFVPHDSVGLIWYDRPHYLIPNDT
HHHHCHHHCCCCCEEEEECCCCCEEEECCCEEEEEEEECCCCCEEEEEECCCCEECCCCC
VGEEAFCVIRDAMTSTNMVGMSRLVLYRRERAVMLEPRDKGIILWTLHYGDEVRREEDYF
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEECCCCCEEEEEEEECCCHHHHHHHHH
EGIKDSRPDPKVMTLVETLIDERTKPWDPAMVTDPVQDRLLEIIASKKKGKKPIKPKAVA
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHH
EAPSNVINIMDALRHSLASESKSPKKD
HCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
APRAFWEGYLKLSLVTCAVAMTPAISEREKVRFHTLNRKTGHRILSQYVDAETGKPVEE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEECCCHHHHHHHHHHHCCCCCCCHHH
ADEVKGYQRGENDYVMLEDAEIDAVRLESTHTIDIDMFVPHDSVGLIWYDRPHYLIPNDT
HHHHCHHHCCCCCEEEEECCCCCEEEECCCEEEEEEEECCCCCEEEEEECCCCEECCCCC
VGEEAFCVIRDAMTSTNMVGMSRLVLYRRERAVMLEPRDKGIILWTLHYGDEVRREEDYF
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEECCCCCEEEEEEEECCCHHHHHHHHH
EGIKDSRPDPKVMTLVETLIDERTKPWDPAMVTDPVQDRLLEIIASKKKGKKPIKPKAVA
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHH
EAPSNVINIMDALRHSLASESKSPKKD
HCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA