Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is ssuA [H]
Identifier: 182677362
GI number: 182677362
Start: 416990
End: 418015
Strand: Direct
Name: ssuA [H]
Synonym: Bind_0365
Alternate gene names: 182677362
Gene position: 416990-418015 (Clockwise)
Preceding gene: 182677361
Following gene: 182677363
Centisome position: 10.0
GC content: 57.89
Gene sequence:
>1026_bases ATGCCTTTGTTGACCCGACGTGGCCTCAATCTTGGCCTTTTGACGTCGAGCGTTTTGGGCATGCGGCCCGTGCAAGCGGA GAGTATTGCCGCGCGGGCGGGCATTATTCCTGTGCTCGGCGCCTCACCTGTTTATGTTGCCGAAAAAGAAGGCTGGTTCA ACGAAGGCGGCCTCAAGGTCAATCTTCTGAAGTTTGAATCGGGTCCCGATGTCATGCAGGCGGCAGCAAGCGGCACGATT GATGTGCATGTTGCGGGAATAGCGCCCGTGGCGGTTGGACGCGCCCATGGAATCGATCTGCGTGTGGTGGCGGCGACGGC GATCGCGGAAAATGTCCTCGTTGCGGGATCGAAATTCGCGGCCGGCCTGCCGCAAAATGTGCCGCCAGCGGAAATGTTCA AGCAATATCGGCAAAAGACGGGTCAGCCGGTTCGTATCGCGACACAGCCGGCGGGCTCCGTTCCCAGCACTAATCTCAAT TACTGGTTGAGCGAGGTGGCTCACGTCGATCCCGCCGATGTCAGGATCGTTTCAATCGGCATTGATGGCGCAACCCAAGC CCTGCTCAGCAATTCCGTTGAGGCCTCGACGATCCGCGAACCTATTCTGACTGTCGCGAAGCAGCGTGATCCCGGCATCA AAATCCTGGCGCTTGGCGATGACCTGTTGCCCGGCCAACCGGGGACTGTCGTCGCTGTTTCGGCGGCTTTCGCGCAGAAA AATCCCGAGGCCGTGCGGACCTTGGTGAAAGGTGTCATACGGGGTGTGGAGCTTCTTCAAAAGGAACCCGACCGGGCGGC TGCGGATATACAAACGAGTCTCGGCAAGGGGATGCTTGATATAGCTCTTATTCGGCAGGCACTGGTTTCTCCGGCGACCC ATTTTGTTGCGGATCCGCATGTCATTTTGAAAGCCACGCAAGTCATGCTGGCCTTCCAGAAGAAGATCGGCACGCTGGAC GAAGTCCCTGAGCTGACGAGCTTGTTCGACACGAGCTTTTATGATGCGGTTATCGCCGGGAAGTGA
Upstream 100 bases:
>100_bases TCGTAAAATCTACAGAATAAGCCTCCAGTCGAGACGGAATCGCGTGCATGCGATCTCGCTTCGCAAAATGCATCTTTCCA CGATTCCCACGGAGCAGGAT
Downstream 100 bases:
>100_bases GGTTGGAGCCGCAAGCGCGTTGCATCGTGTTTTTTGACGCACGTCCATTTGATCCGTTTGCCTAGAGTTGTGGCAAGTCG GATCAACATTGATGCATGTC
Product: nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MPLLTRRGLNLGLLTSSVLGMRPVQAESIAARAGIIPVLGASPVYVAEKEGWFNEGGLKVNLLKFESGPDVMQAAASGTI DVHVAGIAPVAVGRAHGIDLRVVAATAIAENVLVAGSKFAAGLPQNVPPAEMFKQYRQKTGQPVRIATQPAGSVPSTNLN YWLSEVAHVDPADVRIVSIGIDGATQALLSNSVEASTIREPILTVAKQRDPGIKILALGDDLLPGQPGTVVAVSAAFAQK NPEAVRTLVKGVIRGVELLQKEPDRAAADIQTSLGKGMLDIALIRQALVSPATHFVADPHVILKATQVMLAFQKKIGTLD EVPELTSLFDTSFYDAVIAGK
Sequences:
>Translated_341_residues MPLLTRRGLNLGLLTSSVLGMRPVQAESIAARAGIIPVLGASPVYVAEKEGWFNEGGLKVNLLKFESGPDVMQAAASGTI DVHVAGIAPVAVGRAHGIDLRVVAATAIAENVLVAGSKFAAGLPQNVPPAEMFKQYRQKTGQPVRIATQPAGSVPSTNLN YWLSEVAHVDPADVRIVSIGIDGATQALLSNSVEASTIREPILTVAKQRDPGIKILALGDDLLPGQPGTVVAVSAAFAQK NPEAVRTLVKGVIRGVELLQKEPDRAAADIQTSLGKGMLDIALIRQALVSPATHFVADPHVILKATQVMLAFQKKIGTLD EVPELTSLFDTSFYDAVIAGK >Mature_340_residues PLLTRRGLNLGLLTSSVLGMRPVQAESIAARAGIIPVLGASPVYVAEKEGWFNEGGLKVNLLKFESGPDVMQAAASGTID VHVAGIAPVAVGRAHGIDLRVVAATAIAENVLVAGSKFAAGLPQNVPPAEMFKQYRQKTGQPVRIATQPAGSVPSTNLNY WLSEVAHVDPADVRIVSIGIDGATQALLSNSVEASTIREPILTVAKQRDPGIKILALGDDLLPGQPGTVVAVSAAFAQKN PEAVRTLVKGVIRGVELLQKEPDRAAADIQTSLGKGMLDIALIRQALVSPATHFVADPHVILKATQVMLAFQKKIGTLDE VPELTSLFDTSFYDAVIAGK
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 - InterPro: IPR001638 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 35743; Mature: 35612
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLTRRGLNLGLLTSSVLGMRPVQAESIAARAGIIPVLGASPVYVAEKEGWFNEGGLKV CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCEEECCCCCEEEEECCCCCCCCCEEE NLLKFESGPDVMQAAASGTIDVHVAGIAPVAVGRAHGIDLRVVAATAIAENVLVAGSKFA EEEEECCCCHHHHHHCCCCEEEEEECCCCCHHCCCCCCEEEEEEHHHHHHHHHEECCHHH AGLPQNVPPAEMFKQYRQKTGQPVRIATQPAGSVPSTNLNYWLSEVAHVDPADVRIVSIG CCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEE IDGATQALLSNSVEASTIREPILTVAKQRDPGIKILALGDDLLPGQPGTVVAVSAAFAQK CCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHC NPEAVRTLVKGVIRGVELLQKEPDRAAADIQTSLGKGMLDIALIRQALVSPATHFVADPH CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHCCCH VILKATQVMLAFQKKIGTLDEVPELTSLFDTSFYDAVIAGK HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCC >Mature Secondary Structure PLLTRRGLNLGLLTSSVLGMRPVQAESIAARAGIIPVLGASPVYVAEKEGWFNEGGLKV CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCEEECCCCCEEEEECCCCCCCCCEEE NLLKFESGPDVMQAAASGTIDVHVAGIAPVAVGRAHGIDLRVVAATAIAENVLVAGSKFA EEEEECCCCHHHHHHCCCCEEEEEECCCCCHHCCCCCCEEEEEEHHHHHHHHHEECCHHH AGLPQNVPPAEMFKQYRQKTGQPVRIATQPAGSVPSTNLNYWLSEVAHVDPADVRIVSIG CCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEE IDGATQALLSNSVEASTIREPILTVAKQRDPGIKILALGDDLLPGQPGTVVAVSAAFAQK CCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHC NPEAVRTLVKGVIRGVELLQKEPDRAAADIQTSLGKGMLDIALIRQALVSPATHFVADPH CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHCCCH VILKATQVMLAFQKKIGTLDEVPELTSLFDTSFYDAVIAGK HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]